RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 WISP3O95389 354 aaPredicted RBP30.2■■■□□ 2.43
CCM2-219ENST00000544363 COL9A1P20849 921 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 CD72P21854 359 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 RPS3P23396 243 aaKnown RBP eCLIP30.2■■■□□ 2.43
CCM2-219ENST00000544363 SERPINB4P48594 390 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 CCDC153Q494R4 210 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 HSF5Q4G112 596 aaPredicted RBP30.2■■■□□ 2.43
CCM2-219ENST00000544363 TRAM1L1Q8N609 369 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 KCTD4Q8WVF5 259 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 ABCG8Q9H221 673 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 CD248Q9HCU0 757 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 TAS2R13Q9NYV9 303 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 PCDHB1Q9Y5F3 818 aa30.2■■■□□ 2.43
CCM2-219ENST00000544363 PROCP04070 461 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 CCDC15Q0P6D6 951 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 ITIH4Q14624 930 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 PDK4Q16654 411 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 AGBL4Q5VU57 503 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 CYP2U1Q7Z449 544 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 TBC1D1Q86TI0 1168 aaPredicted RBP30.19■■■□□ 2.42
CCM2-219ENST00000544363 PIM3Q86V86 326 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 ADHFE1Q8IWW8 467 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 HDDC3Q8N4P3 179 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 RPLP0P6Q8NHW5 317 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 DTD2Q96FN9 168 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 ZSCAN5AQ9BUG6 496 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 RIOK2Q9BVS4 552 aaKnown RBP30.19■■■□□ 2.42
CCM2-219ENST00000544363 CLPBQ9H078 707 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 EPN3Q9H201 632 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 SMOXQ9NWM0 555 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 ZDHHC3Q9NYG2 299 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 RUVBL2Q9Y230 463 aaKnown RBP30.19■■■□□ 2.42
CCM2-219ENST00000544363 MED16Q9Y2X0 877 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 PLXNA2O75051 1894 aa30.19■■■□□ 2.42
CCM2-219ENST00000544363 AP1G1O43747 822 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 DNAJC6O75061 913 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 KLHL2O95198 593 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 CD9P21926 228 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 ZNF284Q2VY69 593 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 EOGTQ5NDL2 527 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP30.18■■■□□ 2.42
CCM2-219ENST00000544363 BOCQ9BWV1 1114 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 GMNCA6NCL1 334 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 MMP20O60882 483 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 C6P13671 934 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 SLC26A3P40879 764 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 SEC24CP53992 1094 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 CREB5Q02930 508 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 DLG1Q12959 904 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 TSNAXIP1Q2TAA8 658 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 TMPRSS6Q8IU80 811 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 MAFAQ8NHW3 353 aaPredicted RBP30.18■■■□□ 2.42
CCM2-219ENST00000544363 CXorf40AQ8TE69 158 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 NXNL1Q96CM4 212 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 CCDC97Q96F63 343 aaPredicted RBP30.18■■■□□ 2.42
CCM2-219ENST00000544363 UBXN10Q96LJ8 280 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 TMPRSS11EQ9UL52 423 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 NDRG2Q9UN36 371 aaKnown RBP30.18■■■□□ 2.42
CCM2-219ENST00000544363 COQ6Q9Y2Z9 468 aa30.18■■■□□ 2.42
CCM2-219ENST00000544363 A0A1W2PP55 124 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 WDR91A4D1P6 747 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 IRX4P78413 519 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 PDAP1Q13442 181 aaKnown RBP30.17■■■□□ 2.42
CCM2-219ENST00000544363 TMEM207Q6UWW9 146 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 CCDC63Q8NA47 563 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 AP2M1Q96CW1 435 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 GPR78Q96P69 363 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 ZNF317Q96PQ6 595 aaPredicted RBP30.17■■■□□ 2.42
CCM2-219ENST00000544363 COPS8Q99627 209 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 NMRAL1Q9HBL8 299 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 PLXNB3Q9ULL4 1909 aa30.17■■■□□ 2.42
CCM2-219ENST00000544363 TSPAN6O43657 245 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 VPS26AO75436 327 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 RECQL5O94762 991 aaPredicted RBP30.16■■■□□ 2.42
CCM2-219ENST00000544363 DNTTP04053 509 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 PYGLP06737 847 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 TAS2R38P59533 333 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 ZNF852Q6ZMS4 543 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 ZNF765Q7L2R6 523 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 KCNJ9Q92806 393 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 CHMP6Q96FZ7 201 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 IGSF5Q9NSI5 407 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 SERGEFQ9UGK8 458 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 GNPTGQ9UJJ9 305 aa30.16■■■□□ 2.42
CCM2-219ENST00000544363 IGLV3-16A0A075B6K0 115 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 LZTS3O60299 673 aaPredicted RBP30.15■■■□□ 2.42
CCM2-219ENST00000544363 NIPSNAP2O75323 286 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 RNASEH2AO75792 299 aaKnown RBP30.15■■■□□ 2.42
CCM2-219ENST00000544363 LTA4HP09960 611 aaKnown RBP30.15■■■□□ 2.42
CCM2-219ENST00000544363 CCDC166P0CW27 439 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 NSG1P42857 185 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 ZP2Q05996 745 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 CSHL1Q14406 222 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 FAM83EQ2M2I3 478 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 SETMARQ53H47 684 aaPredicted RBP30.15■■■□□ 2.42
CCM2-219ENST00000544363 RGS9BPQ6ZS82 235 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 ANKRD49Q8WVL7 239 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 FAM136AQ96C01 138 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 MMP17Q9ULZ9 603 aa30.15■■■□□ 2.42
CCM2-219ENST00000544363 MTF2Q9Y483 593 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms