RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 TMCC1O94876 653 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ATP6V1B2P21281 511 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 KPNA2P52292 529 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 HK3P52790 923 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 HERVK_113P63132 956 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 SMAD3P84022 425 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ARF5P84085 180 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 CYP4F8P98187 520 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 PARP15Q460N3 678 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 FAM45BPQ6NSW5 357 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 BEND5Q7L4P6 421 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 FAM45AQ8TCE6 357 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 PTCD2Q8WV60 388 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 AARSD1Q9BTE6 412 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ERVK-6Q9BXR3 956 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 TDRD1Q9BXT4 1180 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 PDFQ9HBH1 243 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 RIMS3Q9UJD0 308 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ZNF225Q9UK10 706 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ZNF711Q9Y462 761 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 E5RI56 91 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 SYN3O14994 580 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 TRIM16O95361 564 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 FGF1P05230 155 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 ATP5BP06576 529 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 STX1BP61266 288 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 FAM189BP81408 668 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 CLCQ05315 142 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MAP7D1Q3KQU3 841 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 RFLNAQ6ZTI6 216 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 LARP4Q71RC2 724 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■□□□ 12
SNRNP70-203ENST00000544278 LYSMD3Q7Z3D4 306 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 JADE3Q92613 823 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MTFMTQ96DP5 389 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MPP4Q96JB8 637 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 MAELQ96JY0 434 aaKnown RBP15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 CCDC28BQ9BUN5 200 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 SPATA16Q9BXB7 569 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 POLG2Q9UHN1 485 aa15.68■□□□□ 0.1
SNRNP70-203ENST00000544278 AKAP10O43572 662 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ZNF189O75820 626 aaPredicted RBP15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 IMPDH2P12268 514 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 SLC11A2P49281 568 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 PPP1R8Q12972 351 aaKnown RBP15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 LRP8Q14114 963 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ADGRE1Q14246 886 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 UGT3A2Q3SY77 523 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 TIGD2Q4W5G0 525 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 FAM26DQ5JW98 314 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ARMCX6Q7L4S7 300 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 RALGPS2Q86X27 583 aaPredicted RBP15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 HERC6Q8IVU3 1022 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 APCDD1Q8J025 514 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ARHGAP18Q8N392 663 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 CPSF7Q8N684 471 aaKnown RBP15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ATOH8Q96SQ7 321 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 MRM3Q9HC36 420 aaKnown RBP15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 PCDHGA4Q9Y5G9 962 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 KNL1Q8NG31 2342 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 C7orf72A4D263 438 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 H3BNC9 293 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 ARVCFO00192 962 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 PRRG1O14668 218 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 UFM1P61960 85 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 HECTD3Q5T447 861 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 SYVN1Q86TM6 617 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 TRAPPC9Q96Q05 1148 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 MEAF6Q9HAF1 191 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 MAP10Q9P2G4 905 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 SEPT3Q9UH03 358 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 CROTQ9UKG9 612 aa15.67■□□□□ 0.1
SNRNP70-203ENST00000544278 SLCO1B7G3V0H7 640 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 PRDX6P30041 224 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 CDH15P55291 814 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 POM121L1PQ3SYA9 428 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 LKAAEAR1Q8TD35 194 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 ANKRD27Q96NW4 1050 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 CLSTN3Q9BQT9 956 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 GPR63Q9BZJ6 419 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 PRM3Q9NNZ6 103 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 HMX1Q9NP08 348 aaPredicted RBP15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 A0A1W2PQ67 120 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 NME4O00746 187 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 CD160O95971 181 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 HLA-DPA1P20036 260 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 RHOAP61586 193 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 OR2T11Q8NH01 316 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 SLCO4A1Q96BD0 722 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 FEM1CQ96JP0 617 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 CAPNS2Q96L46 248 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 TRIB3Q96RU7 358 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 HGH1Q9BTY7 390 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 UNC93B1Q9H1C4 597 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 RMI1Q9H9A7 625 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 PHF24Q9UPV7 400 aa15.66■□□□□ 0.1
SNRNP70-203ENST00000544278 TDRKHQ9Y2W6 561 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms