RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ATXN7L3BQ96GX2 97 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 TMEM74Q96NL1 305 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 VPS35Q96QK1 796 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 PACSIN2Q9UNF0 486 aaPredicted RBP23.04■■□□□ 1.28
CHFR-222ENST00000544093 PCDHGA8Q9Y5G5 932 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 OAS3Q9Y6K5 1087 aaKnown RBP23.04■■□□□ 1.28
CHFR-222ENST00000544093 RRP8O43159 456 aaKnown RBP23.03■■□□□ 1.28
CHFR-222ENST00000544093 GRID2O43424 1007 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 ECEL1O95672 775 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 SLC2A4P14672 509 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 ERVPABLB-1P60509 514 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 KLF1Q13351 362 aaPredicted RBP23.03■■□□□ 1.28
CHFR-222ENST00000544093 AADACL2Q6P093 401 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 NAGSQ8N159 534 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 ARL14Q8N4G2 192 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 SLC25A41Q8N5S1 370 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 WDR36Q8NI36 951 aaKnown RBP23.03■■□□□ 1.28
CHFR-222ENST00000544093 BLOC1S5Q8TDH9 187 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 LIN37Q96GY3 246 aaPredicted RBP23.03■■□□□ 1.28
CHFR-222ENST00000544093 PKP3Q9Y446 797 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 ST14Q9Y5Y6 855 aa23.03■■□□□ 1.28
CHFR-222ENST00000544093 CCDC187A0A096LP49 1063 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 A0A0U1RQJ8 604 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 A0A1W2PQM1 296 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 AURKAO14965 403 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 VEGFDO43915 354 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 MPOP05164 745 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 CCKBRP32239 447 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 LRRC69Q6ZNQ3 347 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 ZNF662Q6ZS27 426 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 CHST15Q7LFX5 561 aaPredicted RBP23.02■■□□□ 1.28
CHFR-222ENST00000544093 TTC30BQ8N4P2 665 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 AVL9Q8NBF6 648 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 C10orf88Q9H8K7 445 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 THSD1Q9NS62 852 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 IL17CQ9P0M4 197 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 ATXN10Q9UBB4 475 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 FEZ2Q9UHY8 353 aaPredicted RBP23.02■■□□□ 1.28
CHFR-222ENST00000544093 GUCA1BQ9UMX6 200 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 SATB2Q9UPW6 733 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 FAM208BQ5VWN6 2430 aa23.02■■□□□ 1.28
CHFR-222ENST00000544093 C5orf60A6NFR6 353 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 F5H423 210 aaPredicted RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 CCDC175P0C221 793 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 RBMS1P29558 406 aaKnown RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 SPAM1P38567 509 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 CHRNA4P43681 627 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 FASLGP48023 281 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 PDX1P52945 283 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 INHBCP55103 352 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 MAZP56270 477 aaKnown RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 C3orf38Q5JPI3 329 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 SEL1L2Q5TEA6 688 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 RANBP10Q6VN20 620 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 Q8N9G6 341 aaPredicted RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 BRSK1Q8TDC3 778 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 TMEM159Q96B96 161 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 ALS2CR12Q96Q35 445 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 FRMD8P1Q9BZ68 369 aaPredicted RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 OR2AG1Q9H205 316 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 STN1Q9H668 368 aaKnown RBP23.01■■□□□ 1.27
CHFR-222ENST00000544093 PLEKHM1Q9Y4G2 1056 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 CELSR3Q9NYQ7 3312 aa23.01■■□□□ 1.27
CHFR-222ENST00000544093 CHUKO15111 745 aa23■■□□□ 1.27
CHFR-222ENST00000544093 PSMB4P28070 264 aa23■■□□□ 1.27
CHFR-222ENST00000544093 EIF2S3P41091 472 aaKnown RBP23■■□□□ 1.27
CHFR-222ENST00000544093 CLCNKAP51800 687 aa23■■□□□ 1.27
CHFR-222ENST00000544093 PCBP4P57723 403 aaKnown RBP23■■□□□ 1.27
CHFR-222ENST00000544093 PDE1BQ01064 536 aa23■■□□□ 1.27
CHFR-222ENST00000544093 ITGA9Q13797 1035 aa23■■□□□ 1.27
CHFR-222ENST00000544093 ARHGEF18Q6ZSZ5 1173 aa23■■□□□ 1.27
CHFR-222ENST00000544093 SFTPA2Q8IWL1 248 aa23■■□□□ 1.27
CHFR-222ENST00000544093 CCDC110Q8TBZ0 833 aa23■■□□□ 1.27
CHFR-222ENST00000544093 FAM118BQ9BPY3 351 aa23■■□□□ 1.27
CHFR-222ENST00000544093 C19orf43Q9BQ61 176 aa23■■□□□ 1.27
CHFR-222ENST00000544093 FICDQ9BVA6 458 aa23■■□□□ 1.27
CHFR-222ENST00000544093 ZCCHC2Q9C0B9 1178 aaKnown RBP23■■□□□ 1.27
CHFR-222ENST00000544093 BPIFA1Q9NP55 256 aa23■■□□□ 1.27
CHFR-222ENST00000544093 LAMA5O15230 3695 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 ITPR1Q14643 2758 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 OR5K4A6NMS3 321 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 C2orf81A6NN90 581 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 KMOO15229 486 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 CPNE6O95741 557 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 AGTP01019 485 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 ACP5P13686 325 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 ZNF8P17098 575 aaPredicted RBP22.99■■□□□ 1.27
CHFR-222ENST00000544093 ADRA1AP35348 466 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 B4GALNT1Q00973 533 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 PARP6Q2NL67 630 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 P3H1Q32P28 736 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 ADGRG6Q86SQ4 1221 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 PIM3Q86V86 326 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 LRRC8AQ8IWT6 810 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 SFRP1Q8N474 314 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 SLC46A1Q96NT5 459 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 DPYSL5Q9BPU6 564 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 GORASP1Q9BQQ3 440 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 IL26Q9NPH9 171 aa22.99■■□□□ 1.27
CHFR-222ENST00000544093 GLYATL1P3A0A0U1RQE8 302 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms