RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NCOA3Q9Y6Q9 1424 aa3.76□□□□□ -1.81
SCFD1-207ENST00000544052 FMN2Q9NZ56 1722 aa3.76□□□□□ -1.81
SCFD1-207ENST00000544052 ADGRL3Q9HAR2 1447 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 WDR33Q9C0J8 1336 aaKnown RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 A0A1B0GVM2 712 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 URADA6NGE7 173 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 HSPA4LO95757 839 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 IFNA2P01563 188 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 TFAP4Q01664 338 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 ROR1Q01973 937 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 GRAPQ13588 217 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PLCB4Q15147 1175 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 SOWAHCQ53LP3 525 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 Q5PR19 223 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 C1QTNF12Q5T7M4 302 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 SDCCAG8Q86SQ7 713 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 TSPAN33Q86UF1 283 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 SYT2Q8N9I0 419 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 AGBL3Q8NEM8 1001 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 VPS33AQ96AX1 596 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PGAP3Q96FM1 320 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 EGLN2Q96KS0 407 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 CLK4Q9HAZ1 481 aaKnown RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 DECR2Q9NUI1 292 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 USP32Q8NFA0 1604 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 DCCP43146 1447 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 LOC102723996A0A087X1L8 192 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 TIMM23O14925 209 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 OGG1O15527 345 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PLRG1O43660 514 aaKnown RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 AVILO75366 819 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 KLKB1P03952 638 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 MYF6P23409 242 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 CAPZA2P47755 286 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 RFX5P48382 616 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 LIG4P49917 911 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 MRPS34P82930 218 aaKnown RBP3.75□□□□□ -1.81
SCFD1-207ENST00000544052 TRAF1Q13077 416 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 KCNC3Q14003 757 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 WASHC2DQ5SRD0 308 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PLEKHA7Q6IQ23 1121 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PARM1Q6UWI2 310 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 Q6ZSV7 163 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 VSIG1Q86XK7 387 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 PALB2Q86YC2 1186 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 MIGA1Q8NAN2 632 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 POMGNT2Q8NAT1 580 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 BICD2Q8TD16 824 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 DUSP19Q8WTR2 217 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF622Q969S3 477 aaKnown RBP eCLIP3.75□□□□□ -1.813e-6■□□□□ 8.1
SCFD1-207ENST00000544052 HARBI1Q96MB7 349 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 DGAT2Q96PD7 388 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 OSGEPL1Q9H4B0 414 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 BRWD3Q6RI45 1802 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 CRYBG1Q9Y4K1 1723 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 CDC42BPGQ6DT37 1551 aa3.75□□□□□ -1.81
SCFD1-207ENST00000544052 SPATA31E1Q6ZUB1 1445 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SETD5Q9C0A6 1442 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 JCADQ9P266 1359 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ZMYM2Q9UBW7 1377 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 LRRC72A6NJI9 287 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 GPC4O75487 556 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 NDUFB4O95168 129 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CSPG5O95196 566 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 EPN2O95208 641 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ICAM1P05362 532 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CELA2AP08217 269 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 KELP23276 732 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CHATP28329 748 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PRCPP42785 496 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 METAP2P50579 478 aaKnown RBP eCLIP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 TMF1P82094 1093 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PNLIPRP3Q17RR3 467 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 RARS2Q5T160 578 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 DCAF12L2Q5VW00 463 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF367Q7RTV3 350 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 TMEM199Q8N511 208 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 MINDY1Q8N5J2 469 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 TDRD5Q8NAT2 981 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 OR6J1Q8NGC5 347 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PRSS3P2Q8NHM4 247 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 OTULINQ96BN8 352 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PTERQ96BW5 349 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 CEP295NLQ96MC4 621 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 HAUS8Q9BT25 410 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SEMA4CQ9C0C4 833 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ISCUQ9H1K1 167 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 RABEP2Q9H5N1 569 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 TASP1Q9H6P5 420 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SEBOXQ9HB31 216 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 SIRT3Q9NTG7 399 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ACSS1Q9NUB1 689 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 TRNAU1APQ9NX07 287 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 OR6C3Q9NZP0 311 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 PTCH1Q13635 1447 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 BECN2A8MW95 431 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ZWINTO95229 277 aa3.74□□□□□ -1.81
SCFD1-207ENST00000544052 ABCB1P08183 1280 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-207ENST00000544052 GNLYP22749 145 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms