RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ERP27Q96DN0 273 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 BOCQ9BWV1 1114 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 CLPBQ9H078 707 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 TMEM245Q9H330 911 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 ACTR5Q9H9F9 607 aaPredicted RBP19.68■□□□□ 0.74
COPS7A-218ENST00000543939 HEY2Q9UBP5 337 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 TRMT6Q9UJA5 497 aaKnown RBP19.68■□□□□ 0.74
COPS7A-218ENST00000543939 NUMBLQ9Y6R0 609 aa19.68■□□□□ 0.74
COPS7A-218ENST00000543939 PLXNA2O75051 1894 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 PIKFYVEQ9Y2I7 2098 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 TBC1D3BA6NDS4 549 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 C16orf96A6NNT2 1141 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 NPHS1O60500 1241 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 ECI2O75521 394 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 IPO13O94829 963 aaKnown RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 HLA-EP13747 358 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 ALOX15P16050 662 aaPredicted RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 MTHFRP42898 656 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 ATP6V0D1P61421 351 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 BNIP1Q12981 228 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 TRIM67Q6ZTA4 783 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 MTDHQ86UE4 582 aaKnown RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 NKAPQ8N5F7 415 aaKnown RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 SIDT2Q8NBJ9 832 aaKnown RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 SKA1Q96BD8 255 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 RPP25Q9BUL9 199 aaKnown RBP19.67■□□□□ 0.74
COPS7A-218ENST00000543939 WWP1Q9H0M0 922 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 ACSS2Q9NR19 701 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 CLDND1Q9NY35 253 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 PKD2L2Q9NZM6 624 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 HAO1Q9UJM8 370 aa19.67■□□□□ 0.74
COPS7A-218ENST00000543939 ZNF195O14628 629 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 TSPAN12O95859 305 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 PRNPP04156 253 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 CHRNGP07510 517 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 CHRM3P20309 590 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 GDI1P31150 447 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 LTBRP36941 435 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 SCTRP47872 440 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 CLCN7P51798 805 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 RALGDSQ12967 914 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 OR4D1Q15615 310 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 ARL13AQ5H913 290 aaPredicted RBP19.66■□□□□ 0.74
COPS7A-218ENST00000543939 UGT3A1Q6NUS8 523 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 DPPA4Q7L190 304 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 PIWIL4Q7Z3Z4 852 aaKnown RBP19.66■□□□□ 0.74
COPS7A-218ENST00000543939 TTC7BQ86TV6 843 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 SLC22A9Q8IVM8 553 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 LSMEM2Q8N112 164 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 ZNF781Q8N8C0 355 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 TMIEQ8NEW7 156 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 UCMAQ8WVF2 138 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 KIAA1191Q96A73 305 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 MSLNLQ96KJ4 702 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 ATOH8Q96SQ7 321 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 GNPTGQ9UJJ9 305 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 SARDHQ9UL12 918 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 RAP2CQ9Y3L5 183 aa19.66■□□□□ 0.74
COPS7A-218ENST00000543939 IQCF5A8MTL0 148 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 E5RI56 91 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ARNTLO00327 626 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 SERPINB3P29508 390 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 SERPINB5P36952 375 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 CCR10P46092 362 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 NFKB2Q00653 900 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 POM121L1PQ3SYA9 428 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ATP13A5Q4VNC0 1218 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 SPDYAQ5MJ70 313 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 PTRHD1Q6GMV3 140 aaKnown RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 PARS2Q7L3T8 475 aaKnown RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 MAVSQ7Z434 540 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 HSD11B1LQ7Z5J1 315 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 OR8D1Q8WZ84 308 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 TMEM237Q96Q45 408 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 TRMT61BQ9BVS5 477 aaKnown RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ILKAPQ9H0C8 392 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 CDH19Q9H159 772 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 STN1Q9H668 368 aaKnown RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 CYP4F12Q9HCS2 524 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 NCKIPSDQ9NZQ3 722 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 IKZF3Q9UKT9 509 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 HCN2Q9UL51 889 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 PPM1HQ9ULR3 514 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 DHRS7Q9Y394 339 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 PRSS21Q9Y6M0 314 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 C5orf42Q9H799 3197 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 GOLGA8CPA6NN73 597 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 KAT7O95251 611 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 XPAP23025 273 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ACTN3Q08043 901 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ITPRIPL2Q3MIP1 535 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 MACC1Q6ZN28 852 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 EP400NLQ6ZTU2 488 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 CCNYL1Q8N7R7 359 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ULK4Q96C45 1275 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 CNDP1Q96KN2 507 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 PRO3102Q9H379 93 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 DNAJC28Q9NX36 388 aa19.65■□□□□ 0.74
COPS7A-218ENST00000543939 ZDHHC3Q9NYG2 299 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms