RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 GPC4O75487 556 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 RFPL2O75678 378 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 ITGALP20701 1170 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 HLA-FP30511 346 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 EPHA5P54756 1037 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 SH3BP2P78314 561 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 SLC34A1Q06495 639 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 KYQ8NBH2 561 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 DTX3LQ8TDB6 740 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 POF1BQ8WVV4 589 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 LMLNQ96KR4 655 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 ANKRD27Q96NW4 1050 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 C19orf43Q9BQ61 176 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 LBHD1Q9BQE6 289 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-209ENST00000543886 CLPBQ9H078 707 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 APPL1Q9UKG1 709 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 MTCL1Q9Y4B5 1905 aaKnown RBP16.93■□□□□ 0.3
PTPRO-209ENST00000543886 LRRC14BA6NHZ5 514 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 BNIP3LO60238 219 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 CLDN7O95471 211 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 ZNF7P17097 686 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-209ENST00000543886 SQLEQ14534 574 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 FUT11Q495W5 492 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 PTRHD1Q6GMV3 140 aaKnown RBP16.93■□□□□ 0.3
PTPRO-209ENST00000543886 C22orf39Q6P5X5 142 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 PGM2L1Q6PCE3 622 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 CHSY3Q70JA7 882 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 SNX20Q7Z614 316 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 CPNE9Q8IYJ1 553 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 FBXW8Q8N3Y1 598 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 EEF1AKMT1Q8WVE0 214 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 RCN3Q96D15 328 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 C19orf60Q96EN9 201 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 ASB8Q9H765 288 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 NDE1Q9NXR1 346 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 ANGPTL2Q9UKU9 493 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 TMCO1Q9UM00 188 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 HS3ST2Q9Y278 367 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 SLC4A7Q9Y6M7 1214 aa16.93■□□□□ 0.3
PTPRO-209ENST00000543886 STX16-NPEPL1H3BU86 382 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 STX16O14662 325 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 SNX2O60749 519 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 CDK14O94921 469 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TSPAN12O95859 305 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 RHOP08100 348 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 RPSAP08865 295 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 CD1EP15812 388 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NAA20P61599 178 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 AP2B1P63010 937 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 PPP1R3AQ16821 1122 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TMEM240Q5SV17 173 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 ANKS6Q68DC2 871 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TXNDC11Q6PKC3 985 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 RTL10Q7L3V2 364 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 SERPINA9Q86WD7 417 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TMEM25Q86YD3 366 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TRPC4APQ8TEL6 797 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 ISG20Q96AZ6 181 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 CCDC124Q96CT7 223 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NSUN5Q96P11 429 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TUBGCP5Q96RT8 1024 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 BBS2Q9BXC9 721 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TDP1Q9NUW8 608 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 PRPF19Q9UMS4 504 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 ZNF106Q9H2Y7 1883 aaKnown RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NCF1BA6NI72 391 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 IQCF5A8MTL0 148 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NCF1CA8MVU1 366 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 AZIN1O14977 448 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 TBX10O75333 385 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 FGF4P08620 206 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 BMP1P13497 986 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NCF1P14598 390 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 CLCN7P51798 805 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 CLCQ05315 142 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 LCP2Q13094 533 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 NFATC2Q13469 925 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 ART3Q13508 389 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 MAPRE2Q15555 327 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 MYLK3Q32MK0 819 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 LYPLAL1Q5VWZ2 237 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 GPSM1Q86YR5 675 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 MYLK4Q86YV6 388 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-209ENST00000543886 DSELQ8IZU8 1212 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 RBFAQ8N0V3 343 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 GRIN3AQ8TCU5 1115 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 SERPINI1Q99574 410 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 EFCAB1Q9HAE3 211 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 GNPTGQ9UJJ9 305 aa16.92■□□□□ 0.3
PTPRO-209ENST00000543886 SCN8AQ9UQD0 1980 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 GLYATL1P3A0A0U1RQE8 302 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 A8MX80 341 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 GAPDHSO14556 408 aaPredicted RBP16.91■□□□□ 0.3
PTPRO-209ENST00000543886 CRCPO75575 148 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 RPS3P23396 243 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPRO-209ENST00000543886 SPAM1P38567 509 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 ERFP50548 548 aa16.91■□□□□ 0.3
PTPRO-209ENST00000543886 CDKN3Q16667 212 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms