RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DPYSL4O14531 572 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TRAFD1O14545 582 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PLD2O14939 933 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TLX3O43711 291 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 CALUO43852 315 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ERCC1P07992 297 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 AP2S1P53680 142 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PSME3P61289 254 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 HERVK_113P63132 956 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 REEP5Q00765 189 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 RAB33AQ14088 237 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MARCH8Q5T0T0 291 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 DENND5AQ6IQ26 1287 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 KIAA1161Q6NSJ0 714 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 UNC5AQ6ZN44 842 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 SLCO6A1Q86UG4 719 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF781Q8N8C0 355 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 NRG4Q8WWG1 115 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 GTF3AQ92664 365 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 CCDC17Q96LX7 622 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PI4K2AQ9BTU6 479 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TMEM109Q9BVC6 243 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 SMPD3Q9NY59 655 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ERAP1Q9NZ08 941 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PLAGL2Q9UPG8 496 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 EMSYQ7Z589 1322 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 GIPC1O14908 333 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 GPX5O75715 221 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 GATBO75879 557 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 OPN1MWP04001 364 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PDGFAP04085 211 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 OPN1MW2P0DN77 364 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 OPN1MW3P0DN78 364 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 NSFP46459 744 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 RFX5P48382 616 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 NR1H2P55055 460 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 PSMC5P62195 406 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 DSG1Q02413 1049 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 RUNDC3AQ59EK9 446 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TIGD7Q6NT04 549 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 DENND5BQ6ZUT9 1274 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 LINC00523Q86TU6 105 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MCATQ8IVS2 390 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TP53I13Q8NBR0 393 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 LRRC4BQ9NT99 713 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 KLHL11Q9NVR0 708 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 NCKIPSDQ9NZQ3 722 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 CD300AQ9UGN4 299 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF223Q9UK11 482 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MAST3O60307 1309 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 KLRF2D3W0D1 207 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 H3BSA7 217 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 FCHO1O14526 889 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 SNAPINO95295 136 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 EPOP01588 193 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TALDO1P37837 337 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 RPL6Q02878 288 aaKnown RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 SLAQ13239 276 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 NADK2Q4G0N4 442 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 FDX2Q6P4F2 183 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 CYP4Z1Q86W10 505 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-212ENST00000543766 BBS1Q8NFJ9 593 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MEGF10Q96KG7 1140 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 TAS2R10Q9NYW0 307 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 GGA1Q9UJY5 639 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 ACTL7AQ9Y615 435 aa8.85□□□□□ -0.99
VPS13D-212ENST00000543766 MARCH11A6NNE9 402 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 WASHC1A8K0Z3 465 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 WASH3PC4AMC7 463 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 WWP2O00308 870 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 AOC2O75106 756 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 CHRNA1P02708 482 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A6P19224 532 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A1P22309 533 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A4P22310 534 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A3P35503 534 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT1A5P35504 534 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 UGT2B15P54855 530 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 GPLD1P80108 840 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 POU4F2Q12837 409 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 PAK1Q13153 545 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 SELENBP1Q13228 472 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 ADAM15Q13444 863 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 PRKD1Q15139 912 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-212ENST00000543766 ZNHIT3Q15649 155 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-212ENST00000543766 CHRNA6Q15825 494 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 WASH2PQ6VEQ5 465 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 SLC16A12Q6ZSM3 486 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.84□□□□□ -0.99
VPS13D-212ENST00000543766 NAGSQ8N159 534 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 PARP8Q8N3A8 854 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 OR8J2Q8NGG1 315 aa8.84□□□□□ -0.99
VPS13D-212ENST00000543766 PABPC5Q96DU9 382 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms