RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 POLD2P49005 469 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ARHGAP8P85298 464 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 BNC1Q01954 994 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CACNG1Q06432 222 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 DHX9Q08211 1270 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 BNIP3Q12983 259 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PDIA2Q13087 525 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 NFATC2Q13469 925 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 C1orf61Q13536 156 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 THOC5Q13769 683 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 ELOCQ15369 112 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 SMAD1Q15797 465 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PLA2G4EQ3MJ16 856 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 GPR33Q49SQ1 333 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PRRT3Q5FWE3 981 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TPRG1LQ5T0D9 272 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 FNBP1LQ5T0N5 605 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 STPG1Q5TH74 334 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 DUPD1Q68J44 220 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 HIBCHQ6NVY1 386 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 AFTPHQ6ULP2 937 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CENPUQ71F23 418 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ZNF534Q76KX8 674 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 DET1Q7L5Y6 550 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CHST15Q7LFX5 561 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 SNX20Q7Z614 316 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TAF8Q7Z7C8 310 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 GATAD2AQ86YP4 633 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TRAPPC5Q8IUR0 188 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 ANKMY2Q8IV38 441 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PHACTR4Q8IZ21 702 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 RBFAQ8N0V3 343 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MPP5Q8N3R9 675 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 NOA1Q8NC60 698 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 OR4L1Q8NH43 312 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 GABPB2Q8TAK5 448 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 PTCD2Q8WV60 388 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 SCG3Q8WXD2 468 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 OR1E3Q8WZA6 343 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 VPS35Q96QK1 796 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 COPS8Q99627 209 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 RHOXF2Q9BQY4 288 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 NAT9Q9BTE0 207 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 IL21RQ9HBE5 538 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 TRIM39Q9HCM9 518 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MRPL40Q9NQ50 206 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 PPANQ9NQ55 473 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 FAM114A2Q9NRY5 505 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 RXFP3Q9NSD7 469 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CATSPERZQ9NTU4 200 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 NFKBIL1Q9UBC1 381 aaPredicted RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 SPASTQ9UBP0 616 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MTRF1LQ9UGC7 380 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 SLC2A6Q9UGQ3 507 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CDV3Q9UKY7 258 aaKnown RBP6.26□□□□□ -1.41
LTBR-212ENST00000543542 SUFUQ9UMX1 484 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 CHMP2BQ9UQN3 213 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 RPS6KL1Q9Y6S9 549 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 PCDH15Q96QU1 1955 aa6.26□□□□□ -1.41
LTBR-212ENST00000543542 MYO15AQ9UKN7 3530 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 NEMP2A6NFY4 417 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 F8W8V4 182 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 TNFRSF10CO14798 259 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 KMOO15229 486 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 CD3EAPO15446 510 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 GPR39O43194 453 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 AQP9O43315 295 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 GRID2O43424 1007 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 VEGFDO43915 354 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 NDUFS3O75489 264 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 BANF1O75531 89 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PIAS2O75928 621 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 USP1O94782 785 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 VAPBO95292 243 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 SOD1P00441 154 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 CEACAM5P06731 702 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 IVDP26440 423 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 EPHA8P29322 1005 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 PBLDP30039 288 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 ELK3P41970 407 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PPM1FP49593 454 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 ARSDP51689 593 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 HK3P52790 923 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 TMEM115Q12893 351 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 ILF3Q12906 894 aaKnown RBP eCLIP6.25□□□□□ -1.41
LTBR-212ENST00000543542 EIF2B5Q13144 721 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 MSLNQ13421 630 aaPredicted RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 BIRC2Q13490 618 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 PEX6Q13608 980 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 LONRF1Q17RB8 773 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 INSCQ1MX18 579 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ALG11Q2TAA5 492 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 ANKRD20A4Q4UJ75 823 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 AARS2Q5JTZ9 985 aaKnown RBP6.25□□□□□ -1.41
LTBR-212ENST00000543542 GPRC6AQ5T6X5 926 aa6.25□□□□□ -1.41
LTBR-212ENST00000543542 LYPLAL1Q5VWZ2 237 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms