RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 POLD2P49005 469 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 ARSDP51689 593 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 ITGA8P53708 1063 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 NFATC2Q13469 925 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SUZ12Q15022 739 aaKnown RBP16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 DUPD1Q68J44 220 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 C8orf74Q6P047 294 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 DOK6Q6PKX4 331 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 KANSL1Q7Z3B3 1105 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 RD3Q7Z3Z2 195 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SNX20Q7Z614 316 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 RBFAQ8N0V3 343 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 MPP5Q8N3R9 675 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 BBOF1Q8ND07 529 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 LRRC1Q9BTT6 524 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 RAB17Q9H0T7 212 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 TCEAL2Q9H3H9 227 aaPredicted RBP16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 ASB8Q9H765 288 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SUDS3Q9H7L9 328 aaPredicted RBP16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 CYP4F12Q9HCS2 524 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 MRPL40Q9NQ50 206 aaKnown RBP16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SPASTQ9UBP0 616 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SLC2A6Q9UGQ3 507 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 MOSPD1Q9UJG1 213 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 ANAPC5Q9UJX4 755 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SOX13Q9UN79 622 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 UTP11Q9Y3A2 253 aaKnown RBP16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 SLC30A1Q9Y6M5 507 aa16.96■□□□□ 0.3
RABGGTA-203ENST00000543002 MAGEB16A2A368 324 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 SLC30A4O14863 429 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 TP73O15350 636 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 DGKAP23743 735 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 CA5AP35218 305 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 GPR33Q49SQ1 333 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 LDLRAP1Q5SW96 308 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 GPRC6AQ5T6X5 926 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 GATAD2AQ86YP4 633 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 ZNF548Q8NEK5 533 aaPredicted RBP16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 DDHD1Q8NEL9 900 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 HDAC10Q969S8 669 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 SIGLEC10Q96LC7 697 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 LRRC61Q9BV99 259 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 DPH5Q9H2P9 285 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 RMI1Q9H9A7 625 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 CARS2Q9HA77 564 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 TREX1Q9NSU2 369 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 WHRNQ9P202 907 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 ATXN10Q9UBB4 475 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 CDV3Q9UKY7 258 aaKnown RBP16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 SUFUQ9UMX1 484 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 CSNK1G3Q9Y6M4 447 aa16.95■□□□□ 0.3
RABGGTA-203ENST00000543002 ASCC3Q8N3C0 2202 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 CCDC162PA2VCL2 907 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 GPR89AB7ZAQ6 455 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 FLRT2O43155 660 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 VEGFDO43915 354 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 DNAJC6O75061 913 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 GPR89BP0CG08 455 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 CTSEP14091 401 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 SDHBP21912 280 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 NMBRP28336 390 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 CACNG1Q06432 222 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 KHDC1Q4VXA5 237 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 PRRT3Q5FWE3 981 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 ZRANB3Q5FWF4 1079 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 ZNF648Q5T619 568 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 CASC4Q6P4E1 433 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 ADGRG6Q86SQ4 1221 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 AGGF1Q8N302 714 aaeCLIP16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 SLC25A45Q8N413 288 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 NOA1Q8NC60 698 aaKnown RBP16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 GDAP1Q8TB36 358 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 LMX1AQ8TE12 382 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 ULK4Q96C45 1275 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 SGSM3Q96HU1 749 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 UCKL1Q9NWZ5 548 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 SAMD15Q9P1V8 674 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 CRLS1Q9UJA2 301 aa16.94■□□□□ 0.3
RABGGTA-203ENST00000543002 LRP4O75096 1905 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 TDRD6O60522 2096 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 TRBV5-4A0A0C4DH59 114 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 FAM237BA0A1B0GVD1 139 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 TM4SF5O14894 197 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 AQP9O43315 295 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 NUAK1O60285 661 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 MTX2O75431 263 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 FOXN2P32314 431 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 GNPDA1P46926 289 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 PRAMEP78395 509 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 CALCOCO2Q13137 446 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 C1orf61Q13536 156 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 RSPO4Q2I0M5 234 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 INAVAQ3KP66 663 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 PYCR3Q53H96 274 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 FNBP1LQ5T0N5 605 aa16.93■□□□□ 0.3
RABGGTA-203ENST00000543002 AFTPHQ6ULP2 937 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms