RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RABEP2Q9H5N1 569 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ZWILCHQ9H900 591 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SCPEP1Q9HB40 452 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 FBRSL1Q9HCM7 1045 aaKnown RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 PDE7BQ9NP56 450 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 GPR108Q9NPR9 543 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CCDC177Q9NQR7 707 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 ASAH2Q9NR71 780 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SLC6A13Q9NSD5 602 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 GIMAP4Q9NUV9 329 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 OCIAD1Q9NX40 245 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 QPCTLQ9NXS2 382 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 TAB2Q9NYJ8 693 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 MARCH4Q9P2E8 410 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 RCOR1Q9UKL0 485 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 INTS6Q9UL03 887 aaKnown RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 ERVK-11Q9UQG0 969 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ADAM18Q9Y3Q7 739 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SESN1Q9Y6P5 492 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CAPN7Q9Y6W3 813 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ATXN2Q99700 1313 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 A0A0U1RQJ8 604 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 EME2A4GXA9 379 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 GLOD5A6NK44 160 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 TAF4O00268 1085 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 SLC28A2O43868 658 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 TBCAO75347 108 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 ENTPD3O75355 529 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 E2F6O75461 281 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ERLIN1O75477 346 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 OR2C1O95371 312 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 RB1P06400 928 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 KRT10P13645 584 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 TNFRSF8P28908 595 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 EEF1DP29692 281 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 RDXP35241 583 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 USP8P40818 1118 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 PRPHP41219 470 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ZNF132P52740 706 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 SEC61A1P61619 476 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 DDR1Q08345 913 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 NAE1Q13564 534 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 FRG1Q14331 258 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 FGFBP1Q14512 234 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 IRF3Q14653 427 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 DRAP1Q14919 205 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 RBBP5Q15291 538 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 ASIC2Q16515 512 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 COL28A1Q2UY09 1125 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ZNF585BQ52M93 769 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 KLHL22Q53GT1 634 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 CCDC92Q53HC0 331 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 SGO1Q5FBB7 561 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 XKR9Q5GH70 373 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 BMP2KLQ5H9B9 411 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 PPP6R3Q5H9R7 873 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 GARNL3Q5VVW2 1013 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 NADSYN1Q6IA69 706 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 TSSK4Q6SA08 328 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 LEKR1Q6ZMV7 388 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 HSCBQ8IWL3 235 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 TEX11Q8IYF3 940 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 SCML4Q8N228 414 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 POMGNT2Q8NAT1 580 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 CCDC26Q8TAB7 109 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 GIMAP1Q8WWP7 306 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ATP6V1E2Q96A05 226 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 RTP4Q96DX8 246 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 C1orf74Q96LT6 269 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 SLITRK1Q96PX8 696 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 FIZ1Q96SL8 496 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 KXD1Q9BQD3 176 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ADPGKQ9BRR6 497 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 IFIH1Q9BYX4 1025 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 EDEM3Q9BZQ6 932 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 NDST4Q9H3R1 872 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 C6orf106Q9H6K1 298 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 ERVMER34-1Q9H9K5 563 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 KIF9Q9HAQ2 790 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 GRPEL1Q9HAV7 217 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 DDX4Q9NQI0 724 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 RRP7BPQ9NSQ0 103 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 ARGLU1Q9NWB6 273 aaPredicted RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 DLGAP2Q9P1A6 1054 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 CPSF2Q9P2I0 782 aaKnown RBP3.25□□□□□ -1.89
USP28-210ENST00000542033 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 BLOC1S6Q9UL45 172 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 MKLN1Q9UL63 735 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 SNX9Q9Y5X1 595 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 NFS1Q9Y697 457 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 IKBKGQ9Y6K9 419 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 STON1Q9Y6Q2 735 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 CCDC144AA2RUR9 1427 aa3.25□□□□□ -1.89
USP28-210ENST00000542033 IGLV5-52A0A0A0MRZ9 124 aa3.24□□□□□ -1.89
USP28-210ENST00000542033 A0A1W2PQF6 199 aa3.24□□□□□ -1.89
USP28-210ENST00000542033 TMEM110-MUSTN1A8MSY1 372 aa3.24□□□□□ -1.89
USP28-210ENST00000542033 A8MV72 311 aaPredicted RBP3.24□□□□□ -1.89
USP28-210ENST00000542033 AKR1B15C9JRZ8 316 aaPredicted RBP3.24□□□□□ -1.89
USP28-210ENST00000542033 IFNL4K9M1U5 179 aa3.24□□□□□ -1.89
USP28-210ENST00000542033 ACOT8O14734 319 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms