RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.33
SPIDR-227ENST00000541342 MGME1Q9BQP7 344 aa17.08■□□□□ 0.33
SPIDR-227ENST00000541342 NOL11Q9H8H0 719 aaKnown RBP17.08■□□□□ 0.33
SPIDR-227ENST00000541342 SPAG4Q9NPE6 437 aa17.08■□□□□ 0.33
SPIDR-227ENST00000541342 CPQQ9Y646 472 aa17.08■□□□□ 0.33
SPIDR-227ENST00000541342 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 H6PDO95479 791 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 CXCL14O95715 111 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 GABRR2P28476 465 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 CD151P48509 253 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 OXCT1P55809 520 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 OR13J1Q8NGT2 312 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 OSBPL11Q9BXB4 747 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 LIN28AQ9H9Z2 209 aaKnown RBP17.08■□□□□ 0.32
SPIDR-227ENST00000541342 UBA2Q9UBT2 640 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-227ENST00000541342 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 A0A087X1B8 175 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 H3BNH8 94 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 UBDO15205 165 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 CREMQ03060 361 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 PITRM1Q5JRX3 1037 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 Q6ZNB5 142 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 TMEM106CQ9BVX2 250 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 FBXO5Q9UKT4 447 aa17.08■□□□□ 0.32
SPIDR-227ENST00000541342 MROH6A6NGR9 719 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 CKMT2P17540 419 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 SLC7A1P30825 629 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 ERVFC1P60507 584 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 TRAP1Q12931 704 aaKnown RBP17.07■□□□□ 0.32
SPIDR-227ENST00000541342 STX5Q13190 355 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 NHSL2Q5HYW2 709 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-227ENST00000541342 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 ANKRD49Q8WVL7 239 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 EXOC2Q96KP1 924 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 TIMMDC1Q9NPL8 285 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 LMCD1Q9NZU5 365 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 GFRA2O00451 464 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 SOCS2O14508 198 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 HTRA2O43464 458 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-227ENST00000541342 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
SPIDR-227ENST00000541342 MT-CO1P00395 513 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 GALNT3Q14435 633 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 FUNDC1Q8IVP5 155 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 PSKH2Q96QS6 385 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 CCT7Q99832 543 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 TMEM79Q9BSE2 394 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 FBRSL1Q9HCM7 1045 aaKnown RBP17.07■□□□□ 0.32
SPIDR-227ENST00000541342 INSL6Q9Y581 213 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 KCTD3Q9Y597 815 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 ANKRD36A6QL64 1941 aa17.07■□□□□ 0.32
SPIDR-227ENST00000541342 CBX4O00257 560 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 TBL1XO60907 577 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
SPIDR-227ENST00000541342 ARF5P84085 180 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 POU4F1Q01851 419 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 CLEC6AQ6EIG7 209 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 UBE2Q1Q7Z7E8 422 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 TTC16Q8NEE8 873 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 GSTO2Q9H4Y5 243 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 SEPT3Q9UH03 358 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 A0A0J9YVX5 310 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 CCL22O00626 93 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 DLGAP1O14490 977 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 CD160O95971 181 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 C1RP00736 705 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 SNRPB2P08579 225 aaKnown RBP17.06■□□□□ 0.32
SPIDR-227ENST00000541342 GJA1P17302 382 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 PAMP19021 973 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 KCNC1P48547 511 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 RETREG3Q86VR2 466 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 PHF21BQ96EK2 531 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 C3orf30Q96M34 536 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 TRIB3Q96RU7 358 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 CINPQ9BW66 212 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-227ENST00000541342 ANKRD60Q9BZ19 345 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 MUC3BQ9H195 1237 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 IRAK4Q9NWZ3 460 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 HIDE1A8MVS5 230 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 LDB2O43679 373 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 TIPRLO75663 272 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 C8AP07357 584 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 ALDOCP09972 364 aaKnown RBP17.06■□□□□ 0.32
SPIDR-227ENST00000541342 ATP6V1B2P21281 511 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.328e-7■■■□□ 16.5
SPIDR-227ENST00000541342 TMEM240Q5SV17 173 aa17.06■□□□□ 0.32
SPIDR-227ENST00000541342 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
SPIDR-227ENST00000541342 ATP6AP2A0A1C7CYW4 349 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 MRASO14807 208 aa17.05■□□□□ 0.32
SPIDR-227ENST00000541342 SNAP91O60641 907 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms