RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, human

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX55-208	ENST00000541259	PHB	P35232	272 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	IGFALS	P35858	605 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SLC1A2	P43004	574 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ABCG1	P45844	678 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	GPR1	P46091	355 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	CCR5	P51681	352 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	CLDN2	P57739	230 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	DCDC1	P59894	354 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	MPP1	Q00013	466 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	RPL6	Q02878	288 aa	Known RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	CACNG1	Q06432	222 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	DPT	Q07507	201 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	MGAT5	Q09328	741 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	NFATC2	Q13469	925 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	THOC5	Q13769	683 aa	Known RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	LRRC14	Q15048	493 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	AGER	Q15109	404 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SETMAR	Q53H47	684 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	FASTKD1	Q53R41	847 aa	Known RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ZNF789	Q5FWF6	425 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SPDYC	Q5MJ68	293 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ZNF648	Q5T619	568 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ZDHHC20	Q5W0Z9	365 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ZNF470	Q6ECI4	717 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	RAET1G	Q6H3X3	334 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	PNCK	Q6P2M8	343 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	AFTPH	Q6ULP2	937 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	CYS1	Q717R9	158 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	TAS2R42	Q7RTR8	314 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SNX20	Q7Z614	316 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	LONP2	Q86WA8	852 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SLC41A1	Q8IVJ1	513 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	RAVER1	Q8IY67	606 aa	Known RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	TMEFF1	Q8IYR6	380 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	TRAM1L1	Q8N609	369 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	OTUD6B	Q8N6M0	293 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	PPM1N	Q8N819	430 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	NAT14	Q8WUY8	206 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ASB12	Q8WXK4	309 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	NELL1	Q92832	810 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	POM121	Q96HA1	1249 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SGSM3	Q96HU1	749 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	LENG8	Q96PV6	779 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ORAI3	Q9BRQ5	295 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ACSS3	Q9H6R3	686 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	FBXO6	Q9NRD1	293 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	RAD18	Q9NS91	495 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ARGLU1	Q9NWB6	273 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	APPL1	Q9UKG1	709 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	PLAA	Q9Y263	795 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	NFS1	Q9Y697	457 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SLCO1B1	Q9Y6L6	691 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	SLC30A1	Q9Y6M5	507 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	RALGAPA1	Q6GYQ0	2036 aa		9.27	□□□□□ -0.93
DDX55-208	ENST00000541259	WDFY4	Q6ZS81	3184 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	TRBV5-4	A0A0C4DH59	114 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	POM121B	A6NF01	834 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	AGAP14	A8MT82	685 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	PRR33	A8MZF0	331 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	RNF223	E7ERA6	249 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	POC1B-GALNT4	F8VUJ3	575 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259		H0Y8X5	98 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	OR1I1	O60431	355 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	MTX2	O75431	263 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	HAUS5	O94927	633 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	AHSG	P02765	367 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	SP9	P0CG40	484 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ITGAL	P20701	1170 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	MAOB	P27338	520 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	INPP5A	Q14642	412 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CASP8	Q14790	479 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ANGPT1	Q15389	498 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	DBN1	Q16643	649 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	KHDC1	Q4VXA5	237 aa	Known RBP	9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	SLC36A4	Q6YBV0	504 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ARMCX6	Q7L4S7	300 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	TRIM74	Q86UV6	250 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	NLRP8	Q86W28	1048 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	SERPINA9	Q86WD7	417 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CILP2	Q8IUL8	1156 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CNTN4	Q8IWV2	1026 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CTAGE3P	Q8IX95	158 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	IQCK	Q8N0W5	287 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	C2CD4A	Q8NCU7	369 aa	Predicted RBP	9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	GPR150	Q8NGU9	434 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	SNX19	Q92543	992 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	SPACA7	Q96KW9	195 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	BMF	Q96LC9	184 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ZIM3	Q96PE6	472 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CYTH2	Q99418	400 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ZSCAN5A	Q9BUG6	496 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	BOC	Q9BWV1	1114 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	LGR4	Q9BXB1	951 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CDH19	Q9H159	772 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ZNF446	Q9NWS9	450 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	ZFAT	Q9P243	1243 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	VPS18	Q9P253	973 aa		9.26	□□□□□ -0.93
DDX55-208	ENST00000541259	CRLS1	Q9UJA2	301 aa		9.26	□□□□□ -0.93

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