RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SPRED1Q7Z699 444 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 TTC9BQ8N6N2 239 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 KLHDC9Q8NEP7 349 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ROPN1LQ96C74 230 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 DUS3LQ96G46 650 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 NANOGQ9H9S0 305 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 NTN4Q9HB63 628 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 MRPL40Q9NQ50 206 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 SDR39U1Q9NRG7 319 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 WARS2Q9UGM6 360 aaKnown RBP10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 ANAPC2Q9UJX6 822 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPR45Q9Y5Y3 372 aa10.3□□□□□ -0.76
CDC42SE1-207ENST00000540998 PDHXO00330 501 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 OR1I1O60431 355 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC2A3P11169 496 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 LBPP18428 481 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 GRIK1P39086 918 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ACADVLP49748 655 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCL14Q16627 93 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ENPP6Q6UWR7 440 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 R3HCC1LQ7Z5L2 792 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC22A9Q8IVM8 553 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 CLEC4FQ8N1N0 589 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 DTWD1Q8N5C7 304 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 TBCDQ9BTW9 1192 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ING2Q9H160 280 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 EIF2B4Q9UI10 523 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 BLOC1S6Q9UL45 172 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 RBMX2Q9Y388 322 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 CXCL11O14625 94 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 KATNA1O75449 491 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ECI2O75521 394 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 B3GALT4O96024 378 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 LDLRP01130 860 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 THP07101 528 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 INHBBP09529 407 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 HSD17B1P14061 328 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 NFKBIAP25963 317 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 DCKP27707 260 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 IDUAP35475 653 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 TGFBR1P36897 503 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 AIF1P55008 147 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 CARTPTQ16568 116 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 RBBP7Q16576 425 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZNF772Q68DY9 489 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 XAF1Q6GPH4 301 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 FAM117BQ6P1L5 589 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 CFAP52Q8N1V2 620 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 TNIP2Q8NFZ5 429 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 IGSF8Q969P0 613 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 TMBIM1Q969X1 311 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 L3HYPDHQ96EM0 354 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 IMP4Q96G21 291 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ATOH8Q96SQ7 321 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 SEMA3CQ99985 751 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 RHNO1Q9BSD3 238 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 POLE4Q9NR33 117 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 ABI2Q9NYB9 513 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 FLRT1Q9NZU1 646 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 PRRC2BQ5JSZ5 2229 aaKnown RBP10.29□□□□□ -0.76
CDC42SE1-207ENST00000540998 AQP12BA6NM10 295 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SCAMP3O14828 347 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CD3EAPO15446 510 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 OR4F21O95013 312 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 WISP3O95389 354 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CYBBP04839 570 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ATXN1LP0C7T5 689 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GRK4P32298 578 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 OPRL1P41146 370 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 KCNK10P57789 538 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 PPIL2Q13356 520 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SETMARQ53H47 684 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TMTC4Q5T4D3 741 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MANEALQ5VSG8 457 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MARC1Q5VT66 337 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 KANK2Q63ZY3 851 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 RAP1GAP2Q684P5 730 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 RBM23Q86U06 439 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 AQP12AQ8IXF9 295 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 GPC2Q8N158 579 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 RTL3Q8N8U3 475 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZBTB8BQ8NAP8 495 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SLC22A17Q8WUG5 538 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FIG4Q92562 907 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 ZUFSPQ96AP4 578 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 SDCCAG3Q96C92 435 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 CCDC126Q96EE4 140 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 FEM1CQ96JP0 617 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
CDC42SE1-207ENST00000540998 TINF2Q9BSI4 451 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms