RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CHRNA6Q15825 494 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 DBN1Q16643 649 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 ZSCAN26Q16670 478 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 POM121L1PQ3SYA9 428 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 MMAAQ8IVH4 418 aaKnown RBP14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 PLD6Q8N2A8 252 aaKnown RBP14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 ARMC2Q8NEN0 867 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 ZNF398Q8TD17 642 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 BCAS4Q8TDM0 211 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 TSNARE1Q96NA8 513 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 GABRG3Q99928 467 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 HDAC8Q9BY41 377 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 CDH19Q9H159 772 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 CCDC68Q9H2F9 335 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 ZDHHC4Q9NPG8 344 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
CYB561A3-216ENST00000540755 UBA6A0AVT1 1052 aaPredicted RBP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 EGFP01133 1207 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 PROCP04070 461 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ADRB3P13945 408 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 RPS3P23396 243 aaKnown RBP eCLIP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ACRV1P26436 265 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 TIE1P35590 1138 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 SLC26A3P40879 764 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 METAP1P53582 386 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 SEC24CP53992 1094 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 SEC13P55735 322 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 GRSF1Q12849 480 aaKnown RBP eCLIP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ITGA9Q13797 1035 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF460Q14592 562 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 TSNAXIP1Q2TAA8 658 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 FBXL19Q6PCT2 694 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 TRMT11Q7Z4G4 463 aaKnown RBP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 SERPINA9Q86WD7 417 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 RAB7BQ96AH8 199 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 ULK4Q96C45 1275 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 BIRC8Q96P09 236 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 FOXQ1Q9C009 403 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 RSPH9Q9H1X1 276 aaPredicted RBP14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 FBRSQ9HAH7 460 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 TMEM216Q9P0N5 145 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 PCDHB1Q9Y5F3 818 aa14.14□□□□□ -0.15
CYB561A3-216ENST00000540755 PRMT5O14744 637 aaPredicted RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 AREL1O15033 823 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 BIRC5O15392 142 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 GPR39O43194 453 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 SPINT1O43278 529 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 SYNCRIPO60506 623 aaKnown RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 RNASEH1O60930 286 aaKnown RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 KLHL2O95198 593 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 ESR1P03372 595 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 APOA4P06727 396 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 DCNP07585 359 aaKnown RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 ELFN1P0C7U0 828 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 PKMP14618 531 aaKnown RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF7P17097 686 aaPredicted RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TAC1P20366 129 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 NTSR1P30989 418 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 FMO4P31512 558 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 PSMD8P48556 350 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 KPNA2P52292 529 aaKnown RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 CDKN2DP55273 166 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TIAL1Q01085 375 aaKnown RBP eCLIP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 ITIH4Q14624 930 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TMEM52BQ4KMG9 183 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 SDE2Q6IQ49 451 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 C16orf46Q6P387 395 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 LIPIQ6XZB0 460 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 HSD11B1LQ7Z5J1 315 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TECPR1Q7Z6L1 1165 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 NRSN1Q8IZ57 195 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 CENPLQ8N0S6 344 aaPredicted RBP14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 RBFAQ8N0V3 343 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 NXPE1Q8N323 547 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 LRRC8CQ8TDW0 803 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 P2RY12Q9H244 342 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 FAM83DQ9H4H8 585 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 NMRAL1Q9HBL8 299 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 GPAMQ9HCL2 828 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 ZNF358Q9NW07 568 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 SMOXQ9NWM0 555 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 MID2Q9UJV3 735 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 F5P12259 2224 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 FANCMQ8IYD8 2048 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 CEP250Q9BV73 2442 aa14.13□□□□□ -0.15
CYB561A3-216ENST00000540755 TCP11X1B4DZS4 312 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 NDUFAB1O14561 156 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 OR1I1O60431 355 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 ADH1BP00325 375 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 BPGMP07738 259 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 CA5AP35218 305 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 GMPRP36959 345 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 WASP42768 502 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 PGGT1BP53609 377 aa14.12□□□□□ -0.15
CYB561A3-216ENST00000540755 MRPS21P82921 87 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms