RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 SUPT3HB4E1H0 165 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 CASQ2O14958 399 aaPredicted RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 SUPT3HO75486 399 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 GFAPP14136 432 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 RPS3P23396 243 aaKnown RBP eCLIP9.48□□□□□ -0.89
LCOR-209ENST00000540664 EEF1DP29692 281 aaKnown RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 MRPL19P49406 292 aaKnown RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 ERFP50548 548 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 HK3P52790 923 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 FOXA1P55317 472 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 CDC16Q13042 620 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 ART3Q13508 389 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 FAM219BQ5XKK7 198 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 ANKS6Q68DC2 871 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 CAMK1DQ8IU85 385 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 TMEM199Q8N511 208 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 DDI1Q8WTU0 396 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 EEF1AKMT1Q8WVE0 214 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 TWIST2Q8WVJ9 160 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 YME1L1Q96TA2 773 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 NPAS2Q99743 824 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 TUBB1Q9H4B7 451 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 AKTIPQ9H8T0 292 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 ZDHHC7Q9NXF8 308 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 CACNA2D2Q9NY47 1150 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 KIAA1522Q9P206 1035 aaPredicted RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 INTS6Q9UL03 887 aaKnown RBP9.48□□□□□ -0.89
LCOR-209ENST00000540664 DHRS7Q9Y394 339 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 PCDHB1Q9Y5F3 818 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 PCDHGA7Q9Y5G6 932 aa9.48□□□□□ -0.89
LCOR-209ENST00000540664 TRAV19A0A0A6YYK7 116 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 A0A1B0GTL3 188 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 NPEPPSL1A6NEC2 478 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 BTN3A1O00481 513 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ACOT8O14734 319 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 GPC4O75487 556 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CKMP06732 381 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ALPIP09923 528 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 PRR35P0CG20 571 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CTPS1P17812 591 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 XRCC1P18887 633 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 GPX3P22352 226 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ME2P23368 584 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CD70P32970 193 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 IL2P60568 153 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 HTRA4P83105 476 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 BCL2L1Q07817 233 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 PLEKHG6Q3KR16 790 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 REP15Q6BDI9 236 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CCDC149Q6ZUS6 474 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 NECAB2Q7Z6G3 386 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 FUNDC1Q8IVP5 155 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 TRPC4APQ8TEL6 797 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 LYSMD1Q96S90 227 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 SLC25A23Q9BV35 468 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 GPR63Q9BZJ6 419 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 EVLQ9UI08 416 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 PCTPQ9UKL6 214 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ADAMTS6Q9UKP5 1117 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 SH3BP1Q9Y3L3 701 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 PRMT5O14744 637 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 PIP5K1BO14986 540 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 BCAS2O75934 225 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 BAG2O95816 211 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 LRG1P02750 347 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 C8AP07357 584 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 SNRPB2P08579 225 aaKnown RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 ENO3P13929 434 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 PSME3P61289 254 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 MS4A2Q01362 244 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 AGKQ53H12 422 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 TRIM68Q6AZZ1 485 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 UGT3A1Q6NUS8 523 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 IRGCQ6NXR0 463 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CPNE9Q8IYJ1 553 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 CBARPQ8N350 705 aaPredicted RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 CLP1Q92989 425 aaKnown RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 LINGO1Q96FE5 620 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ECSITQ9BQ95 431 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 NUSAP1Q9BXS6 441 aaKnown RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 SLC46A2Q9BY10 475 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 TM6SF2Q9BZW4 377 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ZFYVE1Q9HBF4 777 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 FBRSL1Q9HCM7 1045 aaKnown RBP9.47□□□□□ -0.89
LCOR-209ENST00000540664 ZNF225Q9UK10 706 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 PPIL1Q9Y3C6 166 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ST14Q9Y5Y6 855 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
LCOR-209ENST00000540664 ATP6AP2A0A1C7CYW4 349 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 CAPN8A6NHC0 703 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 AGAP14A8MT82 685 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 LEFTY2O00292 366 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 TRIM38O00635 465 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 TRIM24O15164 1050 aa9.46□□□□□ -0.89
LCOR-209ENST00000540664 GPR39O43194 453 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms