RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ZNF385AQ96PM9 386 aaKnown RBP6.55□□□□□ -1.36
TRAV11-201ENST00000539512 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
TRAV11-201ENST00000539512 HIPK2Q9H2X6 1198 aa6.55□□□□□ -1.36
TRAV11-201ENST00000539512 GIMAP4Q9NUV9 329 aa6.55□□□□□ -1.36
TRAV11-201ENST00000539512 PSD3Q9NYI0 1048 aa6.55□□□□□ -1.36
TRAV11-201ENST00000539512 MALT1Q9UDY8 824 aa6.55□□□□□ -1.36
TRAV11-201ENST00000539512 SEC63Q9UGP8 760 aaKnown RBP6.55□□□□□ -1.36
TRAV11-201ENST00000539512 PROB1E7EW31 1015 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 KCNN4O15554 427 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 KDM4BO94953 1096 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 KCNK5O95279 499 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 PAPSS2O95340 614 aaPredicted RBP6.54□□□□□ -1.36
TRAV11-201ENST00000539512 ACADLP28330 430 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 STAT2P52630 851 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 GPR139Q6DWJ6 353 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 UTP15Q8TED0 518 aaKnown RBP6.54□□□□□ -1.36
TRAV11-201ENST00000539512 SCMH1Q96GD3 660 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 TMEM19Q96HH6 336 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 WACQ9BTA9 647 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 RAD21L1Q9H4I0 556 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 WDR26Q9H7D7 661 aa6.54□□□□□ -1.36
TRAV11-201ENST00000539512 PPIEQ9UNP9 301 aaKnown RBP6.54□□□□□ -1.36
TRAV11-201ENST00000539512 ZBTB43O43298 467 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SMAD6O43541 496 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 GH2P01242 217 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 RAD52P43351 418 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SF3B4Q15427 424 aaKnown RBP eCLIP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 C15orf59Q2T9L4 293 aaPredicted RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 TMEM198Q66K66 360 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 ZNF280DQ6N043 979 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 PAPD4Q6PIY7 484 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 BRAT1Q6PJG6 821 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 CLEC17AQ6ZS10 378 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SFR1Q86XK3 245 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 CHERPQ8IWX8 916 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 RNF113BQ8IZP6 322 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 PRPF31Q8WWY3 499 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 NEUROD6Q96NK8 337 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SMC6Q96SB8 1091 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SELENONQ9NZV5 590 aa6.53□□□□□ -1.36
TRAV11-201ENST00000539512 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.53□□□□□ -1.36
TRAV11-201ENST00000539512 ANKRD28O15084 1053 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 AVILO75366 819 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 VPREB1P12018 145 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 IL15P40933 162 aaPredicted RBP6.52□□□□□ -1.37
TRAV11-201ENST00000539512 AMPHP49418 695 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 THBS3P49746 956 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 ARSEP51690 589 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 ART1P52961 327 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 DSCR9P59020 149 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 ZXDBP98169 803 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 ZNF155Q12901 538 aaPredicted RBP6.52□□□□□ -1.37
TRAV11-201ENST00000539512 SNTA1Q13424 505 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 MEP1AQ16819 746 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 IRAK1BP1Q5VVH5 260 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 NSUN5P2Q63ZY6 315 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 C18orf63Q68DL7 685 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 DNAAF5Q86Y56 855 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 ZDHHC17Q8IUH5 632 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 MAP7D3Q8IWC1 876 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 SAMD14Q8IZD0 417 aaPredicted RBP6.52□□□□□ -1.37
TRAV11-201ENST00000539512 HMGCLL1Q8TB92 370 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 THAP6Q8TBB0 222 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 DDOQ99489 341 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 MEIS3Q99687 375 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 RTN4RQ9BZR6 473 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 C6orf106Q9H6K1 298 aaPredicted RBP6.52□□□□□ -1.37
TRAV11-201ENST00000539512 PDE7BQ9NP56 450 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 PADI1Q9ULC6 663 aa6.52□□□□□ -1.37
TRAV11-201ENST00000539512 SYNDIG1LA6NDD5 238 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 A6NL46 340 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 CLGNO14967 610 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 SLC16A5O15375 505 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 ENTPD3O75355 529 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 PMS2P2O95744 297 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 MMP9P14780 707 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 AKR1B1P15121 316 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 GJA1P17302 382 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 KRT20P35900 424 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 APOBEC1P41238 236 aaKnown RBP6.51□□□□□ -1.37
TRAV11-201ENST00000539512 PNLIPRP2P54317 469 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 TMF1P82094 1093 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 DLG1Q12959 904 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 NFATC4Q14934 902 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 TMEM35AQ53FP2 167 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 NADSYN1Q6IA69 706 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 TRNP1Q6NT89 227 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 NUDCD2Q8WVJ2 157 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 RHBDF1Q96CC6 855 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 CDCA5Q96FF9 252 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 PAFAH2Q99487 392 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 APOL6Q9BWW8 343 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms