RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 NKAIN2Q5VXU1 208 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 ZNF574Q6ZN55 896 aaPredicted RBP21.98■■□□□ 1.11
SCARB1-206ENST00000539320 CCDC81Q6ZN84 652 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 KATNAL2Q8IYT4 538 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 GPR26Q8NDV2 337 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 OR4D9Q8NGE8 314 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 USP7Q93009 1102 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 DPYSL5Q9BPU6 564 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 HERPUD2Q9BSE4 406 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 STN1Q9H668 368 aaKnown RBP21.98■■□□□ 1.11
SCARB1-206ENST00000539320 FOXJ2Q9P0K8 574 aa21.98■■□□□ 1.11
SCARB1-206ENST00000539320 NUAK1O60285 661 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 PMPCBO75439 489 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 C1QL1O75973 258 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 MARCKSL1P49006 195 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 LIMK2P53671 638 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 SQSTM1Q13501 440 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 TFDP3Q5H9I0 405 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.97■■□□□ 1.11
SCARB1-206ENST00000539320 PDPK2PQ6A1A2 396 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 CCDC70Q6NSX1 233 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 C11orf63Q6NUN7 778 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 TMC3Q7Z5M5 1100 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 ZNF761Q86XN6 746 aaPredicted RBP21.97■■□□□ 1.11
SCARB1-206ENST00000539320 CCDC170Q8IYT3 715 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 TRAM1L1Q8N609 369 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 RCBTB1Q8NDN9 531 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 SRPK1Q96SB4 655 aaKnown RBP21.97■■□□□ 1.11
SCARB1-206ENST00000539320 SLC38A3Q99624 504 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 LUC7LQ9NQ29 371 aaKnown RBP21.97■■□□□ 1.11
SCARB1-206ENST00000539320 ATXN10Q9UBB4 475 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 TBC1D29Q9UFV1 150 aa21.97■■□□□ 1.11
SCARB1-206ENST00000539320 TRBV23OR9-2A0A075B6M9 112 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 hCG_1818297A0A087WSY0 165 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 A6NCN8 305 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 C9orf172C9J069 976 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 MTSS1O43312 755 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 GRID2O43424 1007 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 DUX1O43812 170 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 THRAP10827 490 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 SLC2A4P14672 509 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 ZNF8P17098 575 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 CD82P27701 267 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 CD68P34810 354 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 CYLC1P35663 651 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 HHEXQ03014 270 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 C19orf57Q0VDD7 668 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 WASHC5Q12768 1159 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 SPA17Q15506 151 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 TGIF1Q15583 401 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 PHYKPLQ8IUZ5 450 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 CCDC50Q8IVM0 306 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 OR10G6Q8NH81 332 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 P3H4Q92791 437 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 GLYATL1Q969I3 302 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 WBP1Q96G27 269 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 RBM41Q96IZ5 413 aaKnown RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 B3GNT4Q9C0J1 378 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 OR2AG1Q9H205 316 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 ARFGAP3Q9NP61 516 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 SARS2Q9NP81 518 aaKnown RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 UBP1Q9NZI7 540 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 KLHL8Q9P2G9 620 aaPredicted RBP21.96■■□□□ 1.11
SCARB1-206ENST00000539320 FAM153AQ9UHL3 310 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 PCDHA13Q9Y5I0 950 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 SPO11Q9Y5K1 396 aa21.96■■□□□ 1.11
SCARB1-206ENST00000539320 GPR89AB7ZAQ6 455 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 SNX2O60749 519 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 ZRANB2O95218 330 aaKnown RBP eCLIP21.95■■□□□ 1.11e-5■■■■□ 25.7
SCARB1-206ENST00000539320 SLC25A14O95258 325 aaPredicted RBP21.95■■□□□ 1.1
SCARB1-206ENST00000539320 GPR89BP0CG08 455 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 CCL4P13236 92 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 BPIP17213 487 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 NFKB1P19838 968 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 PPM1FP49593 454 aaPredicted RBP21.95■■□□□ 1.1
SCARB1-206ENST00000539320 CFHR1Q03591 330 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 ADCY2Q08462 1091 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 ZNF648Q5T619 568 aaPredicted RBP21.95■■□□□ 1.1
SCARB1-206ENST00000539320 TMEM164Q5U3C3 297 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 KDELC1Q6UW63 502 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 TTC9Q92623 222 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 HAUS1Q96CS2 278 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 AHCYL2Q96HN2 611 aaKnown RBP21.95■■□□□ 1.1
SCARB1-206ENST00000539320 QKIQ96PU8 341 aaKnown RBP eCLIP21.95■■□□□ 1.1
SCARB1-206ENST00000539320 TRIM39Q9HCM9 518 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 TMEM9Q9P0T7 183 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 TFR2Q9UP52 801 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 ADGRG1Q9Y653 693 aa21.95■■□□□ 1.1
SCARB1-206ENST00000539320 F3P13726 295 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 WNT3AP56704 352 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 NFATC2Q13469 925 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 PPP2R5EQ16537 467 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 KIAA1614Q5VZ46 1190 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 TMEM71Q6P5X7 295 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 IYDQ6PHW0 289 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 CRTC3Q6UUV7 619 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 SLC9B2Q86UD5 537 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 ZC3H18Q86VM9 953 aaKnown RBP21.94■■□□□ 1.1
SCARB1-206ENST00000539320 ZFAND4Q86XD8 727 aa21.94■■□□□ 1.1
SCARB1-206ENST00000539320 RCOR2Q8IZ40 523 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms