RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
C2CD3-213ENST00000539061 PCDHB3Q9Y5E6 796 aa17.14■□□□□ 0.33
C2CD3-213ENST00000539061 FNDC1Q4ZHG4 1894 aaPredicted RBP17.14■□□□□ 0.33
C2CD3-213ENST00000539061 CCDC154A6NI56 674 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 PIRO00625 290 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 TNPO2O14787 897 aaKnown RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 SLC22A1O15245 554 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 KPNA6O60684 536 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 TPTEP56180 551 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 GRIK2Q13002 908 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 DPY19L1Q2PZI1 675 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 PAGE2BQ5JRK9 111 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 CLEC20AQ6ZU45 233 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 ZNF560Q96MR9 790 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 KCNA7Q96RP8 456 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 NODALQ96S42 347 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 IL12RB2Q99665 862 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 TKTL2Q9H0I9 626 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 TPK1Q9H3S4 243 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 EHD1Q9H4M9 534 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 BTRCQ9Y297 605 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 MAGED1Q9Y5V3 778 aaPredicted RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 INMTO95050 263 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 SIX3O95343 332 aaPredicted RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 WISP3O95389 354 aaPredicted RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 F9P00740 461 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 RAP2AP10114 183 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 GP2P55259 537 aaKnown RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 EMX2Q04743 252 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 FAM98BQ52LJ0 330 aaKnown RBP17.13■□□□□ 0.33
C2CD3-213ENST00000539061 RANBP10Q6VN20 620 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 DSG4Q86SJ6 1040 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 PTERQ96BW5 349 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 LRRC3Q9BY71 257 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 KLHL3Q9UH77 587 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 POU2F3Q9UKI9 436 aa17.13■□□□□ 0.33
C2CD3-213ENST00000539061 ZNF99A8MXY4 864 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CD4P01730 458 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CYBBP04839 570 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 ENO2P09104 434 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 TXNP10599 105 aaKnown RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CDKN2DP55273 166 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 OR4D2P58180 307 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 DAOAP59103 153 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 FEM1AQ9BSK4 669 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 MED10Q9BTT4 135 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 SLAMF8Q9P0V8 285 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 GJD2Q9UKL4 321 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 FAM47E-STBD1D6RA91 191 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 G3V2T6 193 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 MGEA5O60502 916 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 GABARAPO95166 117 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 NADKO95544 446 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 C1RP00736 705 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 BMP4P12644 408 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PTPN2P17706 415 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CES1P23141 567 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CHRNB3Q05901 458 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 ILF2Q12905 390 aaKnown RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 FBXO16Q8IX29 292 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 OR52K2Q8NGK3 314 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 ZNF419Q96HQ0 510 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 TEX37Q96LM6 180 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 SPATC1LQ9H0A9 340 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 TSC2P49815 1807 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 LSM1O15116 133 aaKnown RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 SOAT2O75908 522 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PCNAP12004 261 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PCMT1P22061 227 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PNPLA4P41247 253 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 MTHFRP42898 656 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 TAF6P49848 677 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CD47Q08722 323 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 C6orf183Q5T699 404 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PM20D1Q6GTS8 502 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 GALNT7Q86SF2 657 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 SLC22A16Q86VW1 577 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 CILP2Q8IUL8 1156 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 RYBPQ8N488 228 aaPredicted RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 ITFG1Q8TB96 612 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 VTA1Q9NP79 307 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 NECTIN3Q9NQS3 549 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 INTS7Q9NVH2 962 aaKnown RBP17.12■□□□□ 0.33
C2CD3-213ENST00000539061 AIG1Q9NVV5 245 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 IFT52Q9Y366 437 aa17.12■□□□□ 0.33
C2CD3-213ENST00000539061 LRRC14BA6NHZ5 514 aa17.11■□□□□ 0.33
C2CD3-213ENST00000539061 SLC22A3O75751 556 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms