RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 STMND1H3BQB6 276 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 J3KR12 359 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 KCNK1O00180 336 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 MATN3O15232 486 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 JCHAINP01591 159 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 KRT14P02533 472 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 CCNB1P14635 433 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 IGFALSP35858 605 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 MMP13P45452 471 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 RENBPP51606 427 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 CLCN6P51797 869 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 THOP1P52888 689 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 MLLT10P55197 1068 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 RIPPLY3P57055 190 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 TUBB4BP68371 445 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 RFTN1Q14699 578 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 LBRQ14739 615 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 TRIP13Q15645 432 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 ZNF787Q6DD87 383 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 ITPRIPL1Q6GPH6 555 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 TTC27Q6P3X3 843 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 LINGO4Q6UY18 593 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 MACC1Q6ZN28 852 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 SYDE1Q6ZW31 735 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 PID1Q7Z2X4 250 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 TICAM1Q8IUC6 712 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 FSTL5Q8N475 847 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 Q8N9G6 341 aaPredicted RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 OR6C4Q8NGE1 309 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 CCHCR1Q8TD31 782 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 PPP1R16AQ96I34 528 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 ZNF599Q96NL3 588 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 VAT1Q99536 393 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 RAB17Q9H0T7 212 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 CDH19Q9H159 772 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 GPR34Q9UPC5 381 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 PCDHGA3Q9Y5H0 932 aa12.46□□□□□ -0.41
CLSTN3-208ENST00000538933 HIVEP1P15822 2718 aa12.46□□□□□ -0.42
CLSTN3-208ENST00000538933 ANKRD36A6QL64 1941 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 FAM187AA6NFU0 413 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 NKX2-8O15522 239 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 TTI1O43156 1089 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 TSPAN6O43657 245 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 AGFG2O95081 481 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 UGT1A3P35503 534 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 ABL2P42684 1182 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 RECQLP46063 649 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 VPS41P49754 854 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 HK3P52790 923 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 RHOAP61586 193 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 PPARDQ03181 441 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 ELOCQ15369 112 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 P3H1Q32P28 736 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 OGFOD3Q6PK18 319 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 SPRED1Q7Z699 444 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 SFTPA2Q8IWL1 248 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 SSC4DQ8WTU2 575 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 SCG3Q8WXD2 468 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 UBXN4Q92575 508 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 LRRC45Q96CN5 670 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 AGAP3Q96P47 875 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 CEP41Q9BYV8 373 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 PCDH9Q9HC56 1237 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 MBNL1Q9NR56 388 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 RBM22Q9NW64 420 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 PAK5Q9P286 719 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 RSPH14Q9UHP6 348 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
CLSTN3-208ENST00000538933 AKAP9Q99996 3911 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GOLGA6BA6NDN3 693 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 PRR19A6NJB7 356 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 E7EVH7 732 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 K7EM74 188 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 RAD51CO43502 376 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 SEMA7AO75326 666 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TMCC1O94876 653 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ALPIP09923 528 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 FGF3P11487 239 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 PNLIPP16233 465 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GLB1P16278 677 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 PTPN3P26045 913 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 HSPA9P38646 679 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 ADCY8P40145 1251 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 TNNT3P45378 269 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 LMAN1P49257 510 aa12.44□□□□□ -0.42
CLSTN3-208ENST00000538933 GDF10P55107 478 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms