RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MRNIPQ6NTE8 343 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 FBXO38Q6PIJ6 1188 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 CYS1Q717R9 158 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 CILP2Q8IUL8 1156 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 PHYKPLQ8IUZ5 450 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 CNTN4Q8IWV2 1026 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 GDAP1Q8TB36 358 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 CALML6Q8TD86 181 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 HNRNPLLQ8WVV9 542 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 ULK4Q96C45 1275 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 AASDHPPTQ9NRN7 309 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 R4GN57 208 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 DLL1O00548 723 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 MTX2O75431 263 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 OGNP20774 298 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 TRIM23P36406 574 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 MPP1Q00013 466 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 SIM2Q14190 667 aaPredicted RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 KHDC1Q4VXA5 237 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 AARS2Q5JTZ9 985 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 WDR45BQ5MNZ6 344 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 ZNF648Q5T619 568 aaPredicted RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 GPRC6AQ5T6X5 926 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 KYAT3Q6YP21 454 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 DNASE2BQ8WZ79 361 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 FUBP1Q96AE4 644 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 HIC2Q96JB3 615 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 ZC3H10Q96K80 434 aaKnown RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 LGR4Q9BXB1 951 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 TEX101Q9BY14 249 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 ARGLU1Q9NWB6 273 aaPredicted RBP23.3■■□□□ 1.32
TMEM260-202ENST00000538838 FBXO5Q9UKT4 447 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 PSAT1Q9Y617 370 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 HS3ST3A1Q9Y663 406 aa23.3■■□□□ 1.32
TMEM260-202ENST00000538838 GON4LQ3T8J9 2241 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 A6NNZ2 444 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 SLC25A14O95258 325 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-202ENST00000538838 PFN3P60673 137 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 TYSND1Q2T9J0 566 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 ZNF449Q6P9G9 518 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 PRR23BQ6ZRT6 265 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 ABI3BPQ7Z7G0 1075 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 CTAGE3PQ8IX95 158 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 LMNTD2Q8IXW0 634 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 DDHD1Q8NEL9 900 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 PRSS33Q8NF86 280 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 CDKL2Q92772 493 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 COX14Q96I36 57 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 APOOQ9BUR5 198 aa23.29■■□□□ 1.32
TMEM260-202ENST00000538838 FBXO6Q9NRD1 293 aaPredicted RBP23.29■■□□□ 1.32
TMEM260-202ENST00000538838 OAS3Q9Y6K5 1087 aaKnown RBP23.29■■□□□ 1.32
TMEM260-202ENST00000538838 RHOBTB1O94844 696 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 PMLP29590 882 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 STAT4Q14765 748 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 ZNF789Q5FWF6 425 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 LAYNQ6UX15 382 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 SDCCAG8Q86SQ7 713 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-202ENST00000538838 PPM1NQ8N819 430 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 C2CD4AQ8NCU7 369 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-202ENST00000538838 OR13H1Q8NG92 308 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 C1orf216Q8TAB5 229 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 GABPB2Q8TAK5 448 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-202ENST00000538838 CYTH2Q99418 400 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 BOCQ9BWV1 1114 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 TM9SF3Q9HD45 589 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 PHPT1Q9NRX4 125 aaPredicted RBP23.28■■□□□ 1.32
TMEM260-202ENST00000538838 VPS13AQ96RL7 3174 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 LRP4O75096 1905 aa23.28■■□□□ 1.32
TMEM260-202ENST00000538838 SDK1Q7Z5N4 2213 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 SHBGP04278 402 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 MYCLP1P12525 358 aaPredicted RBP23.27■■□□□ 1.32
TMEM260-202ENST00000538838 AKT1P31749 480 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 TTPAP49638 278 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 LPAL2Q16609 132 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 TPRG1LQ5T0D9 272 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 CERS6Q6ZMG9 384 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 MARK2Q7KZI7 788 aaKnown RBP23.27■■□□□ 1.32
TMEM260-202ENST00000538838 NAT14Q8WUY8 206 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 MRRFQ96E11 262 aaKnown RBP23.27■■□□□ 1.32
TMEM260-202ENST00000538838 COPS8Q99627 209 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 ZDHHC3Q9NYG2 299 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 USP34Q70CQ2 3546 aa23.27■■□□□ 1.32
TMEM260-202ENST00000538838 OR1I1O60431 355 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 ABCG1P45844 678 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 TCF15Q12870 199 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 LDLRAP1Q5SW96 308 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 LYPLAL1Q5VWZ2 237 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 DOK6Q6PKX4 331 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 Q6ZSR6 202 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 PIKFYVEQ9Y2I7 2098 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 CACNB4O00305 520 aaPredicted RBP23.26■■□□□ 1.31
TMEM260-202ENST00000538838 NDUFS3O75489 264 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 S1PR4O95977 384 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 WNT1P04628 370 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 RACK1P63244 317 aaKnown RBP23.26■■□□□ 1.31
TMEM260-202ENST00000538838 B4GALNT1Q00973 533 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 PDE1CQ14123 709 aaPredicted RBP23.26■■□□□ 1.31
TMEM260-202ENST00000538838 KLHL38Q2WGJ6 581 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 TCF12Q99081 682 aa23.26■■□□□ 1.31
TMEM260-202ENST00000538838 TMEM98Q9Y2Y6 226 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms