RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 VPS39Q96JC1 886 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 ELMO2Q96JJ3 720 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 SH3GL2Q99962 352 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 BTBD1Q9H0C5 482 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 RHOJQ9H4E5 214 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 USP36Q9P275 1121 aaKnown RBP14.05□□□□□ -0.16
CD4-208ENST00000538827 NFKBIL1Q9UBC1 381 aaPredicted RBP14.05□□□□□ -0.16
CD4-208ENST00000538827 ZNF180Q9UJW8 692 aa14.05□□□□□ -0.16
CD4-208ENST00000538827 FAM95CA0A1B0GW59 222 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 RGSL1A5PLK6 1076 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 FOXO6A8MYZ6 492 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 H3BQF6 201 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 PI15O43692 258 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 CNTFP26441 200 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 MAT2AP31153 395 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 AKT1P31749 480 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 TTPAP49638 278 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 PPP2CBP62714 309 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 RPS21P63220 83 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 PPP2CAP67775 309 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 DBN1Q16643 649 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 ZNF789Q5FWF6 425 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 HENMT1Q5T8I9 393 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 AGBL2Q5U5Z8 902 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 CNSTQ6PJW8 725 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 CYP2U1Q7Z449 544 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 ZC3HC1Q86WB0 502 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 SLC41A1Q8IVJ1 513 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 CYP4X1Q8N118 509 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 TRAM1L1Q8N609 369 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 FAM131CQ96AQ9 280 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 ATP6V1G3Q96LB4 118 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 NDNQ99608 321 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 TTC1Q99614 292 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 MYOCQ99972 504 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 IER2Q9BTL4 223 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 ZSCAN5AQ9BUG6 496 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 MED4Q9NPJ6 270 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 INTS10Q9NVR2 710 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 SPATA6Q9NWH7 488 aaPredicted RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 EURLQ9NYK6 297 aa14.04□□□□□ -0.16
CD4-208ENST00000538827 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 ZFR2Q9UPR6 939 aaKnown RBP14.04□□□□□ -0.16
CD4-208ENST00000538827 LRRC72A6NJI9 287 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 INPP4BO15327 924 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 HAUS5O94927 633 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SEMA4FO95754 770 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SYF2O95926 243 aaKnown RBP14.03□□□□□ -0.16
CD4-208ENST00000538827 AHSGP02765 367 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 MT-ND3P03897 115 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SNRPAP09012 282 aaKnown RBP14.03□□□□□ -0.16
CD4-208ENST00000538827 ACRV1P26436 265 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 GABRB3P28472 473 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 ACSL1P33121 698 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 CA5AP35218 305 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 PPARGP37231 505 aaPredicted RBP14.03□□□□□ -0.16
CD4-208ENST00000538827 MAGEA9P43362 315 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 GPR1P46091 355 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SERPINB8P50452 374 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 CCR3P51677 355 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SGCGQ13326 291 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 RASA2Q15283 850 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 IRF4Q15306 451 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 GPR33Q49SQ1 333 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 ATP13A5Q4VNC0 1218 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 ZNF765Q7L2R6 523 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 HORMAD1Q86X24 394 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SRRM1Q8IYB3 904 aaKnown RBP14.03□□□□□ -0.16
CD4-208ENST00000538827 NXPE1Q8N323 547 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 OR2T34Q8NGX1 318 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 RLN3Q8WXF3 142 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 PGM2Q96G03 612 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 KLF6Q99612 283 aaPredicted RBP14.03□□□□□ -0.16
CD4-208ENST00000538827 C1QTNF7Q9BXJ2 289 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 CDH19Q9H159 772 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 CCDC68Q9H2F9 335 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 SGK2Q9HBY8 427 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 VPS9D1Q9Y2B5 631 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 DOCK9Q9BZ29 2069 aa14.03□□□□□ -0.16
CD4-208ENST00000538827 FADS2P1A8MWK0 482 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 HMGB1P1B2RPK0 211 aaPredicted RBP14.02□□□□□ -0.17
CD4-208ENST00000538827 TPP1O14773 563 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 S1PR4O95977 384 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 FMO4P31512 558 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 CXCL12P48061 93 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 LEPRP48357 1165 aaKnown RBP14.02□□□□□ -0.17
CD4-208ENST00000538827 SLC12A2P55011 1212 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 MAGOHP61326 146 aaKnown RBP14.02□□□□□ -0.17
CD4-208ENST00000538827 RBM20Q5T481 1227 aaKnown RBP14.02□□□□□ -0.17
CD4-208ENST00000538827 GPRC6AQ5T6X5 926 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 LYPLAL1Q5VWZ2 237 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 FAM45BPQ6NSW5 357 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 PHYKPLQ8IUZ5 450 aa14.02□□□□□ -0.17
CD4-208ENST00000538827 RBFAQ8N0V3 343 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms