RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 TMEM150CB9EJG8 249 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 TIMP1P01033 207 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 VHLP40337 213 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 HK2P52789 917 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 RFTN1Q14699 578 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SOWAHAQ2M3V2 549 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SLC26A9Q7LBE3 791 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SMYD1Q8NB12 490 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 IGSF21Q96ID5 467 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 GPR21Q99679 349 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 KLHL4Q9C0H6 718 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SLC25A51Q9H1U9 297 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 LEF1Q9UJU2 399 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 MYOM1P52179 1685 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 ADGRA3Q8IWK6 1321 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 RFXANKO14593 260 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 KCNJ5P48544 419 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 NRG3P56975 720 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CYP4F3Q08477 520 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 C2orf80Q0P641 193 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 INAQ16352 499 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SGCBQ16585 318 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CERS6Q6ZMG9 384 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 BNIPLQ7Z465 357 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 TMC8Q8IU68 726 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CMTR2Q8IYT2 770 aaKnown RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 C12orf76Q8N812 135 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CLEC4CQ8WTT0 213 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 ZNF75CPQ92670 426 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 OR52E6Q96RD3 313 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 RIOK2Q9BVS4 552 aaKnown RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 RNF39Q9H2S5 420 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 NUDT4Q9NZJ9 180 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CDC14AQ9UNH5 594 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 PCDHB3Q9Y5E6 796 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 ACTL7BQ9Y614 415 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 AZIN1O14977 448 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 DCXO43602 365 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 CLUP10909 449 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 ATP6V1B1P15313 513 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 PSMB9P28065 219 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 MEA1Q16626 185 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 LIPMQ5VYY2 423 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 TMEM126BQ8IUX1 230 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 C4orf32Q8N8J7 132 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 RMND5BQ96G75 393 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 ANKHQ9HCJ1 492 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 XPR1Q9UBH6 696 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
PTPRB-204ENST00000538708 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
PTPRB-204ENST00000538708 A0A1B0GW55 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 A8MUA0 341 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 TPD52L2O43399 206 aaKnown RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L2P0CJ85 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L3P0CJ86 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L4P0CJ87 422 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L5P0CJ88 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L6P0CJ89 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4L7P0CJ90 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 VIPR1P32241 457 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 SPIRE1Q08AE8 756 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CLEC20AQ6ZU45 233 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 TEX47Q8TBZ9 253 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 MBOAT7Q96N66 472 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CEP44Q9C0F1 390 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 SLC32A1Q9H598 525 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 RXFP1Q9HBX9 757 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 DUX4Q9UBX2 424 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 HAPLN1P10915 354 aaPredicted RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 SLC6A2P23975 617 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 MARCKSL1P49006 195 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 MAPK12P53778 367 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 PSMD4P55036 377 aaKnown RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CDC42P60953 191 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 NOMO1Q15155 1222 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 MON1BQ7L1V2 547 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 LDB1Q86U70 411 aaPredicted RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 AVL9Q8NBF6 648 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 MAPK15Q8TD08 544 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 NCSTNQ92542 709 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 KLHDC7BQ96G42 594 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 PRICKLE1Q96MT3 831 aaPredicted RBP9.4□□□□□ -0.9
PTPRB-204ENST00000538708 NECTIN4Q96NY8 510 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 TMEM79Q9BSE2 394 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 RNF121Q9H920 327 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 LINC00854A0A1B0GVQ3 168 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 YJEFN3A6XGL0 299 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CAPN14A8MX76 684 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 E7ENQ6 273 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 XKRYO14609 159 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CLDN9O95484 217 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 RHOP08100 348 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 TSHRP16473 764 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 CPN2P22792 545 aa9.4□□□□□ -0.9
PTPRB-204ENST00000538708 ME2P23368 584 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms