RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 EME1Q96AY2 570 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 CWH43Q9H720 699 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 H0Y626 953 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 TSPAN12O95859 305 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 PIM1P11309 404 aaPredicted RBP24.72■■□□□ 1.55
RAB40C-204ENST00000538492 LIN52Q52LA3 116 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 SCIMPQ6UWF3 145 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 HACD2Q6Y1H2 254 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 DCBLD1Q8N8Z6 715 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 SLCO4A1Q96BD0 722 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 LINGO1Q96FE5 620 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 Q9H521 79 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 RAB26Q9ULW5 256 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 MKI67P46013 3256 aaKnown RBP24.72■■□□□ 1.55
RAB40C-204ENST00000538492 RPS17P08708 135 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 POLE2P56282 527 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 TRAP1Q12931 704 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 NRF1Q16656 503 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ATXN7L2Q5T6C5 722 aaPredicted RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 CPNE9Q8IYJ1 553 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 TOP1MTQ969P6 601 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ROPN1LQ96C74 230 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 KLF16Q9BXK1 252 aaPredicted RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 AFF4Q9UHB7 1163 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 FCF1Q9Y324 198 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ASB1Q9Y576 335 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 PCDHB9Q9Y5E1 797 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 SNX13Q9Y5W8 968 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ANGPT2O15123 496 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 TBL1XO60907 577 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 PRAMEF12O95522 483 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 YBX1P67809 324 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 CAPRIN1Q14444 709 aaKnown RBP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.71■■□□□ 1.55
RAB40C-204ENST00000538492 SYVN1Q86TM6 617 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 HERC6Q8IVU3 1022 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ZNF461Q8TAF7 563 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 CD200R1Q8TD46 325 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 CREBZFQ9NS37 354 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 ZNF225Q9UK10 706 aa24.71■■□□□ 1.55
RAB40C-204ENST00000538492 E5RI56 91 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 CES1P23141 567 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 HK3P52790 923 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 RBBP7Q16576 425 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 CENPKQ9BS16 269 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 TRIM8Q9BZR9 551 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 BACE2Q9Y5Z0 518 aa24.7■■□□□ 1.55
RAB40C-204ENST00000538492 PITPNM1O00562 1244 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 NME4O00746 187 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 IL2P60568 153 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 NAIF1Q69YI7 327 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-204ENST00000538492 NCEH1Q6PIU2 408 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 DHFR2Q86XF0 187 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 TTC30BQ8N4P2 665 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 SPDYE1Q8NFV5 336 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-204ENST00000538492 IGSF21Q96ID5 467 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 HGH1Q9BTY7 390 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 SDR39U1Q9NRG7 319 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-204ENST00000538492 APPL1Q9UKG1 709 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 PCTPQ9UKL6 214 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 VPS9D1Q9Y2B5 631 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 YIPF1Q9Y548 306 aa24.7■■□□□ 1.54
RAB40C-204ENST00000538492 BBIP1A8MTZ0 92 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 PGM3O95394 542 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 FESP07332 822 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 CTPS1P17812 591 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 PSMA3P25788 255 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 OR6K2Q8NGY2 324 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 CAPNS2Q96L46 248 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 SLC22A12Q96S37 553 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 ACOX2Q99424 681 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 CD274Q9NZQ7 290 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 ANAPC1Q9H1A4 1944 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 TCRBV3S1A0A5B6 114 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 ZNF839A8K0R7 811 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 MBL2P11226 248 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-204ENST00000538492 GRIA3P42263 894 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 RHOAP61586 193 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 AMIGO2Q86SJ2 522 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 FAM110BQ8TC76 370 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 PAPOLBQ9NRJ5 636 aaKnown RBP24.69■■□□□ 1.54
RAB40C-204ENST00000538492 LHX3Q9UBR4 397 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 EIF2B4Q9UI10 523 aaKnown RBP24.69■■□□□ 1.54
RAB40C-204ENST00000538492 NDUFAF1Q9Y375 327 aa24.69■■□□□ 1.54
RAB40C-204ENST00000538492 PFDN6O15212 129 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 SNX2O60749 519 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 EFEMP2O95967 443 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 CAPNS1P04632 268 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 ALPIP09923 528 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 BMP1P13497 986 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 SMAD3P84022 425 aaKnown RBP24.68■■□□□ 1.54
RAB40C-204ENST00000538492 GPSM1Q86YR5 675 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 PIP4K2CQ8TBX8 421 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 EID2BQ96D98 161 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 MYRFLQ96LU7 910 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 CEP295NLQ96MC4 621 aa24.68■■□□□ 1.54
RAB40C-204ENST00000538492 GPATCH1Q9BRR8 931 aaKnown RBP24.68■■□□□ 1.54
RAB40C-204ENST00000538492 ZNF26P17031 533 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-204ENST00000538492 CCDC97Q96F63 343 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-204ENST00000538492 TEX37Q96LM6 180 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms