RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	MBD6	Q96DN6	1003 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	CHFR	Q96EP1	664 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	MYEOV	Q96EZ4	313 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	RHOXF2	Q9BQY4	288 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	FEM1A	Q9BSK4	669 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	OSBPL6	Q9BZF3	934 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	MAGEH1	Q9H213	219 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	PRDM16	Q9HAZ2	1276 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	LTB4R2	Q9NPC1	389 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	HAUS2	Q9NVX0	235 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	TMEM248	Q9NWD8	314 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	KCMF1	Q9P0J7	381 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	USP36	Q9P275	1121 aa	Known RBP	4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	RSPH14	Q9UHP6	348 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	MCM8	Q9UJA3	840 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	SLC25A13	Q9UJS0	675 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	APOBEC2	Q9Y235	224 aa	Known RBP	4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	TBC1D30	Q9Y2I9	924 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	PCDHA3	Q9Y5H8	950 aa		4.37	□□□□□ -1.71
SNHG1-208	ENST00000538266	MYOF	Q9NZM1	2061 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266		A0A0D9SEW6	157 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	C3orf70	A6NLC5	250 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RASA4B	C9J798	803 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NPC1	O15118	1278 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	GPR39	O43194	453 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RASA4	O43374	803 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	SYNCRIP	O60506	623 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CST8	O60676	142 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ATG13	O75143	517 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	KLF8	O95600	359 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CD48	P09326	243 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	DLD	P09622	509 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CISD3	P0C7P0	127 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	KRT10	P13645	584 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	HOXA5	P20719	270 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	TGM2	P21980	687 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CSF2RB	P32927	897 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CDKN2B	P42772	138 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	MAGEA9	P43362	315 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RECQL	P46063	649 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NR2C2	P49116	596 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NUMB	P49757	651 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ARSE	P51690	589 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NDST2	P52849	883 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	MRPS21	P82921	87 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ECT2L	Q008S8	904 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	FAP	Q12884	760 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	USP10	Q14694	798 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	STARD3	Q14849	445 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	LLGL1	Q15334	1064 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	GEN1	Q17RS7	908 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ACCSL	Q4AC99	568 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	FSCB	Q5H9T9	825 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	EOGT	Q5NDL2	527 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	TMEM200B	Q69YZ2	307 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CXorf57	Q6NSI4	855 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RETSAT	Q6NUM9	610 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	MFSD7	Q6UXD7	560 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	BZW1	Q7L1Q6	419 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ADIPOR2	Q86V24	386 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NLRP14	Q86W24	1093 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	LRRC49	Q8IUZ0	686 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	C10orf67	Q8IYJ2	551 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CCDC105	Q8IYK2	499 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	APCDD1	Q8J025	514 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	UMODL1-AS1	Q8N2C9	162 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	BBS5	Q8N3I7	341 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ALLC	Q8N6M5	410 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NPW	Q8N729	165 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CLRN3	Q8NCR9	226 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CCNY	Q8ND76	341 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	OR7D4	Q8NG98	312 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RPLP0P6	Q8NHW5	317 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	WFDC5	Q8TCV5	224 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	SORCS1	Q8WY21	1168 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	P3H4	Q92791	437 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	FAF2	Q96CS3	445 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	HMCES	Q96FZ2	354 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	HES6	Q96HZ4	224 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CELF6	Q96J87	481 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CCDC114	Q96M63	670 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RNF157	Q96PX1	679 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	PSMB7	Q99436	277 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	FERMT1	Q9BQL6	677 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	C1QTNF1	Q9BXJ1	281 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	HEMGN	Q9BXL5	484 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	MAGEB5	Q9BZ81	275 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CARD9	Q9H257	536 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	LMAN1L	Q9HAT1	526 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RBM12	Q9NTZ6	932 aa	Known RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	ELOVL2	Q9NXB9	296 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	SAE1	Q9UBE0	346 aa	Predicted RBP	4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	CLEC4E	Q9ULY5	219 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	NEU3	Q9UQ49	428 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	INVS	Q9Y283	1065 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	HEY1	Q9Y5J3	304 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	RAD54B	Q9Y620	910 aa		4.36	□□□□□ -1.71

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