RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NFE2L1Q14494 772 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 NKAIN2Q5VXU1 208 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ALKBH2Q6NS38 261 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ZCCHC23Q6ZST2 131 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 FAM92BQ6ZTR7 304 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 PKNOX2Q96KN3 472 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 GPR21Q99679 349 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 C1QTNF1Q9BXJ1 281 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 TCEAL2Q9H3H9 227 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 XAB2Q9HCS7 855 aaKnown RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 RNF112Q9ULX5 631 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 THSD7BQ9C0I4 1608 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 KRT38O76015 456 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 JMJD7P0C870 316 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CHRNB1P11230 501 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 TSHRP16473 764 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 C5AR1P21730 350 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 MPLP40238 635 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ALDH9A1P49189 494 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 RPS21P63220 83 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 RAPSNQ13702 412 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 IMPG1Q17R60 797 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 GPRC6AQ5T6X5 926 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 AMZ2Q86W34 360 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 HORMAD1Q86X24 394 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 IL22RA1Q8N6P7 574 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 KCT2Q8NC54 265 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ARMC2Q8NEN0 867 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CPT1BQ92523 772 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CYTH2Q99418 400 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ZCCHC2Q9C0B9 1178 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 CASS4Q9NQ75 786 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ZNF638Q14966 1978 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 PRAMEF33A0A0G2JMD5 474 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 C5orf60A6NFR6 353 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 GRID2O43424 1007 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ZNF217O75362 1048 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 FGF1P05230 155 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 PYGLP06737 847 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CCDC166P0CW27 439 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 KELP23276 732 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 MEF2AQ02078 507 aaPredicted RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 KIF19Q2TAC6 998 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 SLC44A2Q8IWA5 706 aaPredicted RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 UMODL1-AS1Q8N2C9 162 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 SIDT2Q8NBJ9 832 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 CDKN2AIPNLQ96HQ2 116 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CDH19Q9H159 772 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 AKAP7Q9P0M2 348 aaPredicted RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 HCN2Q9UL51 889 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 A0A0J9YVX5 310 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 TMEM202A6NGA9 273 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 K7EQS6 105 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 DNALI1O14645 258 aaPredicted RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 TSPAN6O43657 245 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 GMFGO60234 142 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 GPC4O75487 556 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CDC123O75794 336 aaPredicted RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 TOP3BO95985 862 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 TIMP2P16035 220 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 HLA-DPA1P20036 260 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 PRKCQQ04759 706 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 PPIDQ08752 370 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 CPSF6Q16630 551 aaKnown RBP eCLIP7.18□□□□□ -1.26
MSH6-209ENST00000538136 PFKFB4Q16877 469 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 KLHDC10Q6PID8 442 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 RPS27LQ71UM5 84 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 MYO1HQ8N1T3 1032 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 PGBD5Q8N414 524 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 FAXDC2Q96IV6 333 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 C1orf74Q96LT6 269 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 CTRCQ99895 268 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 MACROD1Q9BQ69 325 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 NOL6Q9H6R4 1146 aaKnown RBP7.18□□□□□ -1.26
MSH6-209ENST00000538136 PHTF1Q9UMS5 762 aa7.18□□□□□ -1.26
MSH6-209ENST00000538136 ADAM23O75077 832 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 HAUS5O94927 633 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PGLSO95336 258 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZDHHC11BP0C7U3 371 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GDF5P43026 501 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 CD151P48509 253 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 MRPS21P82921 87 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 FCHO2Q0JRZ9 810 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GALNT2Q10471 571 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 TMEM115Q12893 351 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 NAE1Q13564 534 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 SNX30Q5VWJ9 437 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 DPY19L2P1Q6NXN4 242 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 BRAT1Q6PJG6 821 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PIWIL4Q7Z3Z4 852 aaKnown RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 RAB44Q7Z6P3 723 aaPredicted RBP7.17□□□□□ -1.26
MSH6-209ENST00000538136 CPLX4Q7Z7G2 160 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZDHHC14Q8IZN3 488 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GPR156Q8NFN8 814 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 PDXPQ96GD0 296 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 VAT1Q99536 393 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 GBA3Q9H227 469 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ACTR8Q9H981 624 aa7.17□□□□□ -1.26
MSH6-209ENST00000538136 ZNF358Q9NW07 568 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms