RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 FAM117BQ6P1L5 589 aa14□□□□□ -0.17
CLPB-209ENST00000538039 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
CLPB-209ENST00000538039 IFT80Q9P2H3 777 aaPredicted RBP14□□□□□ -0.17
CLPB-209ENST00000538039 ECI2O75521 394 aa14□□□□□ -0.17
CLPB-209ENST00000538039 SOAT2O75908 522 aa14□□□□□ -0.17
CLPB-209ENST00000538039 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
CLPB-209ENST00000538039 SLC2A3P11169 496 aa14□□□□□ -0.17
CLPB-209ENST00000538039 IL10P22301 178 aa14□□□□□ -0.17
CLPB-209ENST00000538039 CAPGP40121 348 aa14□□□□□ -0.17
CLPB-209ENST00000538039 RPS9P46781 194 aaKnown RBP14□□□□□ -0.17
CLPB-209ENST00000538039 GNA12Q03113 381 aa14□□□□□ -0.17
CLPB-209ENST00000538039 MS4A13Q5J8X5 152 aa14□□□□□ -0.17
CLPB-209ENST00000538039 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
CLPB-209ENST00000538039 MARC1Q5VT66 337 aa14□□□□□ -0.17
CLPB-209ENST00000538039 SNX29P2Q8IUI4 249 aa14□□□□□ -0.17
CLPB-209ENST00000538039 SEPT8Q92599 483 aa14□□□□□ -0.17
CLPB-209ENST00000538039 TRMOQ9BU70 441 aa14□□□□□ -0.17
CLPB-209ENST00000538039 CHID1Q9BWS9 393 aa14□□□□□ -0.17
CLPB-209ENST00000538039 ZNF408Q9H9D4 720 aa14□□□□□ -0.17
CLPB-209ENST00000538039 TMEM165Q9HC07 324 aa14□□□□□ -0.17
CLPB-209ENST00000538039 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
CLPB-209ENST00000538039 SMPD3Q9NY59 655 aaPredicted RBP14□□□□□ -0.17
CLPB-209ENST00000538039 TSR3Q9UJK0 312 aaKnown RBP14□□□□□ -0.17
CLPB-209ENST00000538039 LOC285095A0A1B0GVY8 99 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 TRIM64BA6NI03 449 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 FGF10O15520 208 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 PRR35P0CG20 571 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 LBPP18428 481 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 FMO4P31512 558 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 GRIK1P39086 918 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLPB-209ENST00000538039 LDLRAD1Q5T700 205 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 IRAK1BP1Q5VVH5 260 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 ZNF354CQ86Y25 554 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 AFAP1L2Q8N4X5 818 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SLC15A4Q8N697 577 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 BPIFB6Q8NFQ5 453 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SNX19Q92543 992 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 TADA1Q96BN2 335 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 RNF145Q96MT1 663 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 PRDM5Q9NQX1 630 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 TUBA8Q9NY65 449 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 SPO11Q9Y5K1 396 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 A0A1W2PP18 115 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 OR1I1O60431 355 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 MATN4O95460 622 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 CYBBP04839 570 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 HTR1AP08908 422 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 IMPDH2P12268 514 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 IL7RP16871 459 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 GRK4P32298 578 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 NUP107P57740 925 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 MTPNP58546 118 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 CDC42EP1Q00587 391 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 LAPTM5Q13571 262 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 RCAN2Q14206 197 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 DHRSXQ8N5I4 330 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PACRGLQ8N7B6 248 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 OR52B6Q8NGF0 335 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PROKR1Q8TCW9 393 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 CALML6Q8TD86 181 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SEMA3CQ99985 751 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 KCTD14Q9BQ13 255 aaPredicted RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 ACBD6Q9BR61 282 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 C9orf16Q9BUW7 83 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 ACTL8Q9H568 366 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 FANCEQ9HB96 536 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 FBXO10Q9UK96 956 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PCDHGA11Q9Y5H2 935 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 NPEPPSL1A6NEC2 478 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 BBIP1A8MTZ0 92 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SUPT3HB4E1H0 165 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 HMBSP08397 361 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 FSHRP23945 695 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 TRAF2Q12933 501 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 INPP5AQ14642 412 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 BRMS1LQ5PSV4 323 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 LAIR2Q6ISS4 152 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SCN4BQ8IWT1 228 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 RIMKLAQ8IXN7 391 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PDPRQ8NCN5 879 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 TTC16Q8NEE8 873 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 SLC22A17Q8WUG5 538 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 ISG20Q96AZ6 181 aaKnown RBP13.99□□□□□ -0.17
CLPB-209ENST00000538039 SLC10A4Q96EP9 437 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 PPM1MQ96MI6 270 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 LHPPQ9H008 270 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 ABCC13Q9NSE7 274 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 EXD2Q9NVH0 621 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 ZNF639Q9UID6 485 aa13.99□□□□□ -0.17
CLPB-209ENST00000538039 C17orf102A2RUQ5 167 aa13.98□□□□□ -0.17
CLPB-209ENST00000538039 PCSK1P29120 753 aa13.98□□□□□ -0.17
CLPB-209ENST00000538039 RGRP47804 291 aa13.98□□□□□ -0.17
CLPB-209ENST00000538039 HTR6P50406 440 aa13.98□□□□□ -0.17
CLPB-209ENST00000538039 ZNF135P52742 658 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms