RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 RNF6Q9Y252 685 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FKBP7Q9Y680 259 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RIF1Q5UIP0 2472 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DOCK5Q9H7D0 1870 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GPR153Q6NV75 609 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GALNTL5Q7Z4T8 443 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OAFQ86UD1 273 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ENDOVQ8N8Q3 282 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DHRS1Q96LJ7 313 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 S100A13Q99584 98 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF471Q9BX82 626 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ABCG8Q9H221 673 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HOXC10Q9NYD6 342 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 AHSPQ9NZD4 102 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TRHDEQ9UKU6 1024 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FAM50BQ9Y247 325 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 NCAM2O15394 837 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RAB5BP61020 215 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GALNT3Q14435 633 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GCNT6Q5T4J0 391 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 UNC5AQ6ZN44 842 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SYT12Q8IV01 421 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OMDQ99983 421 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 WACQ9BTA9 647 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TAS2R9Q9NYW1 312 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CYTH4Q9UIA0 394 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TVP23AA6NH52 213 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TBX3O15119 743 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DYNC1LI2O43237 492 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DNAJA2O60884 412 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 UMPSP11172 480 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HPGDP15428 266 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 NR4A2P43354 598 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PTGES3Q15185 160 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 VPS26BQ4G0F5 336 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 XKRXQ6PP77 449 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 JPH3Q8WXH2 748 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 IDI2Q9BXS1 227 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ANKHQ9HCJ1 492 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TAS2R3Q9NYW6 316 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OPTCQ9UBM4 332 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OAZ3Q9UMX2 235 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CORO2BQ9UQ03 480 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RNF17Q9BXT8 1623 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HACD1B0YJ81 288 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PLIN3O60664 434 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TFEBP19484 476 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TUBG1P23258 451 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 POLR2JP52435 117 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SV2CQ496J9 727 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DEDD2Q8WXF8 326 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GTPBP3Q969Y2 492 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF700Q9H0M5 742 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CKLFQ9UBR5 152 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SEC14L4Q9UDX3 406 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TRAF6Q9Y4K3 522 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 EPHB6O15197 1021 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MSH4O15457 936 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 DFNA5O60443 496 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 VDRP11473 427 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 AFF1P51825 1210 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CBWD3Q5JTY5 395 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CBWD5Q5RIA9 395 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM236Q5W0B7 351 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ASB18Q6ZVZ8 466 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SVOPLQ8N434 492 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 OR4A15Q8NGL6 344 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 OR52J3Q8NH60 311 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CD300LFQ8TDQ1 290 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ANKEF1Q9NU02 776 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 KCNIP3Q9Y2W7 256 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 FAM47E-STBD1D6RA91 191 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TXNL1O43396 289 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 OIP5O43482 229 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SLITRK5O94991 958 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CCR4P51679 360 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF177Q13360 481 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MIIPQ5JXC2 388 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SCML4Q8N228 414 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 OR2L5Q8NG80 312 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 KCNC2Q96PR1 638 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IFT46Q9NQC8 304 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ENTPD4Q9Y227 616 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PRMT3O60678 531 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 EPORP19235 508 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MATN1P21941 496 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 VEPH1Q14D04 833 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SMIM5Q71RC9 77 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 LDHDQ86WU2 507 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 LNX1Q8TBB1 728 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CST11Q9H112 138 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 FAM208BQ5VWN6 2430 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 TEX46H3BTG2 121 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IL32P24001 234 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PCSK1P29120 753 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CIAPIN1Q6FI81 312 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 COMTD1Q86VU5 262 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 KIF18BQ86Y91 864 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 SEPT5Q99719 369 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms