RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TMEM199Q8N511 208 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 DPP10Q8N608 796 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 LRRC52Q8N7C0 313 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 OR52E4Q8NGH9 312 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 NDNFQ8TB73 568 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 SLC16A10Q8TF71 515 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 TWIST2Q8WVJ9 160 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 NDRG1Q92597 394 aaKnown RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 WNT8BQ93098 351 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 PGAP3Q96FM1 320 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 REXO5Q96IC2 774 aaKnown RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 RPL10LQ96L21 214 aaKnown RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 ASB2Q96Q27 587 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 GPR20Q99678 358 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 KCTD14Q9BQ13 255 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 TBL1YQ9BQ87 522 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 BRINP2Q9C0B6 783 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 NXF2Q9GZY0 626 aaKnown RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 CXCL16Q9H2A7 254 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 DSN1Q9H410 356 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 ALG2Q9H553 416 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 DUSP21Q9H596 190 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 IL1RL2Q9HB29 575 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 PIGVQ9NUD9 493 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 POLR3BQ9NW08 1133 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 OPTCQ9UBM4 332 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 POLG2Q9UHN1 485 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 SLCO3A1Q9UIG8 710 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 LEF1Q9UJU2 399 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF112Q9UJU3 913 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 INTS6Q9UL03 887 aaKnown RBP6.89□□□□□ -1.31
CPSF7-215ENST00000536145 BAG5Q9UL15 447 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 NEU3Q9UQ49 428 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 ATP11BQ9Y2G3 1177 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 PCDHGA10Q9Y5H3 936 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 SPO11Q9Y5K1 396 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 PTGDR2Q9Y5Y4 395 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 A3GALT2U3KPV4 340 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 SBF1O95248 1867 aa6.89□□□□□ -1.31
CPSF7-215ENST00000536145 COL1A2P08123 1366 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ATP6AP2A0A1C7CYW4 349 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 FAM172BPA6NC97 362 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 C9JVG2 144 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ARNTLO00327 626 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 TOR1BO14657 336 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 AZIN1O14977 448 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 SLC7A4O43246 635 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 KPNA6O60684 536 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 HUS1O60921 280 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 VPS4BO75351 444 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 KATNA1O75449 491 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ATP6AP2O75787 350 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 RAD17O75943 681 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 C22orf31O95567 290 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 CHEK2O96017 543 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 MT-CO1P00395 513 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 C1RP00736 705 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 NPPAP01160 153 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 JCHAINP01591 159 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 MT-ND1P03886 318 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ANXA6P08133 673 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 RAP2AP10114 183 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ITGAMP11215 1152 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 MTHFD2P13995 350 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ARF4P18085 180 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-215ENST00000536145 POLR2EP19388 210 aaKnown RBP6.88□□□□□ -1.31
CPSF7-215ENST00000536145 GGT1P19440 569 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 NR4A1P22736 598 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 EEF1B2P24534 225 aaKnown RBP6.88□□□□□ -1.31
CPSF7-215ENST00000536145 PIGAP37287 484 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 NR4A2P43354 598 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 PCYT1AP49585 367 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 SUOXP51687 545 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 CLCNKBP51801 687 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF135P52742 658 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-215ENST00000536145 FOXA1P55317 472 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ARPC4P59998 168 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 HERVK_113P63132 956 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 TIAL1Q01085 375 aaKnown RBP eCLIP6.88□□□□□ -1.315e-6■■■■□ 21
CPSF7-215ENST00000536145 EMX1Q04741 257 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-215ENST00000536145 CHRNEQ04844 493 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 KCNAB2Q13303 367 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 E2F2Q14209 437 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 IMPG1Q17R60 797 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 FAM83EQ2M2I3 478 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF181Q2M3W8 571 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 KIF19Q2TAC6 998 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 XKR7Q5GH72 579 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 FAM209AQ5JX71 171 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 HECTD2Q5U5R9 776 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 TMEM236Q5W0B7 351 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
CPSF7-215ENST00000536145 PM20D1Q6GTS8 502 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms