RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 HIP1RO75146 1068 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PENKP01210 267 aaPredicted RBP4□□□□□ -1.77
YBX3-205ENST00000536107 CSF2P04141 144 aa4□□□□□ -1.77
YBX3-205ENST00000536107 HMBSP08397 361 aa4□□□□□ -1.77
YBX3-205ENST00000536107 KRT19P08727 400 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PDGFRBP09619 1106 aa4□□□□□ -1.77
YBX3-205ENST00000536107 FGF3P11487 239 aaPredicted RBP4□□□□□ -1.77
YBX3-205ENST00000536107 ATP5C1P36542 298 aaKnown RBP4□□□□□ -1.77
YBX3-205ENST00000536107 PNPLA4P41247 253 aa4□□□□□ -1.77
YBX3-205ENST00000536107 NPTX2P47972 431 aa4□□□□□ -1.77
YBX3-205ENST00000536107 LHX1P48742 406 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PPM1FP49593 454 aaPredicted RBP4□□□□□ -1.77
YBX3-205ENST00000536107 VAMP7P51809 220 aa4□□□□□ -1.77
YBX3-205ENST00000536107 IST1P53990 364 aa4□□□□□ -1.77
YBX3-205ENST00000536107 ZFP36L1Q07352 338 aaKnown RBP4□□□□□ -1.77
YBX3-205ENST00000536107 MCL1Q07820 350 aa4□□□□□ -1.77
YBX3-205ENST00000536107 ARHGEF7Q14155 803 aa4□□□□□ -1.77
YBX3-205ENST00000536107 TCEA2Q15560 299 aa4□□□□□ -1.77
YBX3-205ENST00000536107 MAPRE1Q15691 268 aaKnown RBP4□□□□□ -1.77
YBX3-205ENST00000536107 KYAT1Q16773 422 aa4□□□□□ -1.77
YBX3-205ENST00000536107 AMZ1Q400G9 498 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PIK3R6Q5UE93 754 aa4□□□□□ -1.77
YBX3-205ENST00000536107 APOA5Q6Q788 366 aa4□□□□□ -1.77
YBX3-205ENST00000536107 GPRIN1Q7Z2K8 1008 aa4□□□□□ -1.77
YBX3-205ENST00000536107 TMEM135Q86UB9 458 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PARGQ86W56 976 aa4□□□□□ -1.77
YBX3-205ENST00000536107 CD302Q8IX05 232 aa4□□□□□ -1.77
YBX3-205ENST00000536107 RHOT1Q8IXI2 618 aa4□□□□□ -1.77
YBX3-205ENST00000536107 TMEM86AQ8N2M4 240 aa4□□□□□ -1.77
YBX3-205ENST00000536107 AADATQ8N5Z0 425 aa4□□□□□ -1.77
YBX3-205ENST00000536107 ARL10Q8N8L6 244 aa4□□□□□ -1.77
YBX3-205ENST00000536107 Q8NA96 180 aa4□□□□□ -1.77
YBX3-205ENST00000536107 WFIKKN2Q8TEU8 576 aa4□□□□□ -1.77
YBX3-205ENST00000536107 OVCA2Q8WZ82 227 aa4□□□□□ -1.77
YBX3-205ENST00000536107 NINJ1Q92982 152 aa4□□□□□ -1.77
YBX3-205ENST00000536107 C14orf79Q96F83 325 aa4□□□□□ -1.77
YBX3-205ENST00000536107 FEM1CQ96JP0 617 aa4□□□□□ -1.77
YBX3-205ENST00000536107 C8orf48Q96LL4 319 aa4□□□□□ -1.77
YBX3-205ENST00000536107 FOXC2Q99958 501 aa4□□□□□ -1.77
YBX3-205ENST00000536107 SYT15Q9BQS2 421 aa4□□□□□ -1.77
YBX3-205ENST00000536107 SLC26A6Q9BXS9 759 aa4□□□□□ -1.77
YBX3-205ENST00000536107 TEX101Q9BY14 249 aa4□□□□□ -1.77
YBX3-205ENST00000536107 TRIM55Q9BYV6 548 aa4□□□□□ -1.77
YBX3-205ENST00000536107 SLC2A11Q9BYW1 496 aa4□□□□□ -1.77
YBX3-205ENST00000536107 SLC13A1Q9BZW2 595 aa4□□□□□ -1.77
YBX3-205ENST00000536107 DCLK3Q9C098 648 aa4□□□□□ -1.77
YBX3-205ENST00000536107 AGPAT4Q9NRZ5 378 aa4□□□□□ -1.77
YBX3-205ENST00000536107 ABCB8Q9NUT2 735 aa4□□□□□ -1.77
YBX3-205ENST00000536107 APOBEC3BQ9UH17 382 aaKnown RBP4□□□□□ -1.77
YBX3-205ENST00000536107 CLEC4EQ9ULY5 219 aa4□□□□□ -1.77
YBX3-205ENST00000536107 ZNF510Q9Y2H8 683 aa4□□□□□ -1.77
YBX3-205ENST00000536107 CEP83Q9Y592 693 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PCDHGA3Q9Y5H0 932 aa4□□□□□ -1.77
YBX3-205ENST00000536107 PCDHA9Q9Y5H5 950 aa4□□□□□ -1.77
YBX3-205ENST00000536107 SNX9Q9Y5X1 595 aa4□□□□□ -1.77
YBX3-205ENST00000536107 NUMA1Q14980 2115 aa4□□□□□ -1.77
YBX3-205ENST00000536107 DCHS2Q6V1P9 2916 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 KLF18A0A0U1RQI7 1052 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 FAM171A2A8MVW0 826 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 LMO7DNF2Z398 122 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 M0QYT0 321 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 MGST3O14880 152 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 GCATO75600 419 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 HEXAP06865 529 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 ITGAMP11215 1152 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 GCFC2P16383 781 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 HNRNPA2B1P22626 353 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 NFKBIAP25963 317 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 MAN1A1P33908 653 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 DLSTP36957 453 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 LIG4P49917 911 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 TUBP50607 506 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 NHLH2Q02577 135 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 CHAF1BQ13112 559 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 GNL2Q13823 731 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 PDE1CQ14123 709 aaPredicted RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 FZD2Q14332 565 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 CEBPEQ15744 281 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 CHRNA6Q15825 494 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 HNRNPA1L2Q32P51 320 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 MDH1BQ5I0G3 518 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 C10orf120Q5SQS8 335 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 FAXCQ5TGI0 409 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 RNF219Q5W0B1 726 aaPredicted RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 ANKS6Q68DC2 871 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 SLFN12LQ6IEE8 588 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 ARMC6Q6NXE6 501 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 FAM171BQ6P995 826 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 ZNF788Q6ZQV5 615 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 PARS2Q7L3T8 475 aaKnown RBP3.99□□□□□ -1.77
YBX3-205ENST00000536107 NEK8Q86SG6 692 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 PIM3Q86V86 326 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 TMEM200AQ86VY9 491 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 TRIM69Q86WT6 500 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 BLIDQ8IZY5 108 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 RBFAQ8N0V3 343 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 SLC22A18ASQ8N1D0 253 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 STK40Q8N2I9 435 aa3.99□□□□□ -1.77
YBX3-205ENST00000536107 PDPRQ8NCN5 879 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms