RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 RBM22Q9NW64 420 aaKnown RBP eCLIP12.83□□□□□ -0.366e-10■■□□□ 12.5
TNFRSF1A-207ENST00000535958 CPNE7Q9UBL6 633 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 IP6K2Q9UHH9 426 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 AMACRQ9UHK6 382 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ANAPC7Q9UJX3 599 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 POLHQ9Y253 713 aa12.83□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PDZK1P1A8MUH7 402 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GOLGA6L22H0YM25 854 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MATN3O15232 486 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MFSD11O43934 449 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KATNA1O75449 491 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DLGAP3O95886 979 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ANKRD34CP0C6C1 535 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TCF4P15884 667 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 IFI16Q16666 785 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ATP1A1-AS1Q5TC04 95 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 EFCAB3Q8N7B9 438 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TGM7Q96PF1 710 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SMIM14Q96QK8 99 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ADGRE3Q9BY15 652 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LMBRD1Q9NUN5 540 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 AIPL1Q9NZN9 384 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LNPEPQ9UIQ6 1025 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KCND3Q9UK17 655 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TP53TG5Q9Y2B4 290 aa12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MRPS18BQ9Y676 258 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 OAS3Q9Y6K5 1087 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MN1Q10571 1320 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RGSL1A5PLK6 1076 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.363e-9■■□□□ 12.9
TNFRSF1A-207ENST00000535958 NUAK1O60285 661 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RFPL1O75677 317 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 UBXN7O94888 489 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SLC4A1P02730 911 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MX2P20592 715 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CASP14P31944 242 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PRKCIP41743 596 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SPINT3P49223 89 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SEPHS1P49903 392 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GFERP55789 205 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GALNT2Q10471 571 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ERV3-1Q14264 604 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SEPT7Q16181 437 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PLA2G4EQ3MJ16 856 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 HENMT1Q5T8I9 393 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ALG1LQ6GMV1 187 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 APTXQ7Z2E3 356 aaKnown RBP12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ELMO2Q96JJ3 720 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 OR6C1Q96RD1 312 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MLPHQ9BV36 600 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PRDM8Q9NQV8 689 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CROTQ9UKG9 612 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MAN2B2Q9Y2E5 1009 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 COL12A1Q99715 3063 aa12.81□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CDC14CA4D256 554 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SMTNL1A8MU46 457 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 FADS2P1A8MWK0 482 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GPR89AB7ZAQ6 455 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MYO1FO00160 1098 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TOX3O15405 576 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 VPS4BO75351 444 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SLC25A14O95258 325 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 NDUFA10O95299 355 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MT-ND3P03897 115 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GPR89BP0CG08 455 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SKILP12757 684 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TYRP1P17643 537 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 VCLP18206 1134 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCNCP24863 283 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 SLC25A11Q02978 314 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ALS2CLQ60I27 953 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CRTC3Q6UUV7 619 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ASB18Q6ZVZ8 466 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MAP7D3Q8IWC1 876 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 KCTD6Q8NC69 237 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 GALNT6Q8NCL4 622 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 MAML1Q92585 1016 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 CXorf40BQ96DE9 158 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 RNF31Q96EP0 1072 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
TNFRSF1A-207ENST00000535958 ZSCAN5AQ9BUG6 496 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms