RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 GDF15Q99988 308 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 BTBD10Q9BSF8 475 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 RTKNQ9BST9 563 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 PAPOLGQ9BWT3 736 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 STRA6Q9BX79 667 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 NPLQ9BXD5 320 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 GSDMCQ9BYG8 508 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 TM6SF1Q9BZW5 370 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 TINAGL1Q9GZM7 467 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ISCUQ9H1K1 167 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 HSD3B7Q9H2F3 369 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MMP27Q9H306 513 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 FOXP1Q9H334 677 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 LDAHQ9H6V9 325 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 UGT1A7Q9HAW7 530 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 UGT1A10Q9HAW8 530 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 UGT1A8Q9HAW9 530 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MKNK2Q9HBH9 465 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 PCDH9Q9HC56 1237 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 SPON1Q9HCB6 807 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 CRTAC1Q9NQ79 661 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 PRDM7Q9NQW5 492 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ARHGEF4Q9NR80 690 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 FAM120CQ9NX05 1096 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 THUMPD1Q9NXG2 353 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ING3Q9NXR8 418 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 OBP2AQ9NY56 170 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ABCD2Q9UBJ2 740 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 GRHPRQ9UBQ7 328 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 CNOT8Q9UFF9 292 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 DAPK2Q9UIK4 370 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 DBNLQ9UJU6 430 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 VPS28Q9UK41 221 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MAN1B1Q9UKM7 699 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 TRHDEQ9UKU6 1024 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 AMFRQ9UKV5 643 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 COPS3Q9UNS2 423 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 SLC22A14Q9Y267 594 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MAN2B2Q9Y2E5 1009 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 PLLPQ9Y342 182 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 SNX13Q9Y5W8 968 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 SLC22A7Q9Y694 548 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 CYP46A1Q9Y6A2 500 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ADGRL1O94910 1474 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ARHGAP35Q9NRY4 1499 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 UBE4BO95155 1302 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 ADGRA3Q8IWK6 1321 aa5.18□□□□□ -1.58
SNHG1-201ENST00000535076 RIMS1Q86UR5 1692 aaKnown RBP5.18□□□□□ -1.58
SNHG1-201ENST00000535076 MYO5CQ9NQX4 1742 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 A0A1B0GVM2 712 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 hCG_1642624A0A1W2PR95 340 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 H3BSA7 217 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 CES2O00748 559 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 ITGB1BP1O14713 200 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 APAF1O14727 1248 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 ZBTB5O15062 677 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 KIAA0391O15091 583 aaKnown RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 TOX3O15405 576 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 MAGEB2O15479 319 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 AKR7A2O43488 359 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PEX10O60683 326 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 NDUFS2O75306 463 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 RFPL2O75678 378 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 LRIG2O94898 1065 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 AHSA1O95433 338 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 IFNA2P01563 188 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 IGHV2-70P01814 119 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 AMHP03971 560 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PRKCBP05771 671 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 YES1P07947 543 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 MYBP10242 640 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 MBL2P11226 248 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 COX4I1P13073 169 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 HNRNPLP14866 589 aaKnown RBP eCLIP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 TCF4P15884 667 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 DCKP27707 260 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PIK3R1P27986 724 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 IL12AP29459 219 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 APOBEC3AP31941 199 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 GRK4P32298 578 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PPM1AP35813 382 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 FDFT1P37268 417 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 DDOSTP39656 456 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PAFAH1B1P43034 410 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 VEGFCP49767 419 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 MAGOHP61326 146 aaKnown RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 COPZ1P61923 177 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 RPS26P62854 115 aaKnown RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 TNFAIP2Q03169 654 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PPATQ06203 517 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 DSC1Q08554 894 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 CD300CQ08708 224 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 SPIRE1Q08AE8 756 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 TFCP2Q12800 502 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 PLCL1Q15111 1095 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 TARBP2Q15633 366 aaKnown RBP5.17□□□□□ -1.58
SNHG1-201ENST00000535076 ETFDHQ16134 617 aa5.17□□□□□ -1.58
SNHG1-201ENST00000535076 MEA1Q16626 185 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms