RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 C8orf76Q96K31 380 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ACCSQ96QU6 501 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 GFM1Q96RP9 751 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MNTQ99583 582 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 IL12RB2Q99665 862 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CGRRF1Q99675 332 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC2A11Q9BYW1 496 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 PANK2Q9BZ23 570 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CPEB1Q9BZB8 566 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 DCLK3Q9C098 648 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FBXO44Q9H4M3 255 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MRPL44Q9H9J2 332 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CSNK1G1Q9HCP0 422 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 COMMD8Q9NX08 183 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 XPO7Q9UIA9 1087 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ODF2LQ9ULJ1 636 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FZD4Q9ULV1 537 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SCML1Q9UN30 329 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF510Q9Y2H8 683 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MRPS18BQ9Y676 258 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 RNF215Q9Y6U7 377 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CKAP5Q14008 2032 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF469Q96JG9 3925 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ANAPC1Q9H1A4 1944 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 VPS13CQ709C8 3753 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TSC2P49815 1807 aa3.03□□□□□ -1.93
CHMP4A-208ENST00000534106 DOCK9Q9BZ29 2069 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 UBE4BO95155 1302 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 DENND4CQ5VZ89 1909 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 SPTY2D1-AS1A0A0U1RR47 76 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ZNF233A6NK53 670 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 EFCAB7A8K855 629 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 GOLGA6L22H0YM25 854 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 K7ERQ8 282 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 DAPK3O43293 454 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 B4GAT1O43505 415 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 MAGEC1O60732 1142 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TCEA3O75764 348 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 DNAJB5O75953 348 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 IPO13O94829 963 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ENDOD1O94919 500 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PCDH8O95206 1070 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 GCNT3O95395 438 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 VNN1O95497 513 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CRTAMO95727 393 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 MT-CO1P00395 513 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 LDLRP01130 860 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CTSLP07711 333 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM163BP0C2L3 166 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM200BP0CF97 657 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FGF3P11487 239 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TSHRP16473 764 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TNNI1P19237 187 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 F8A1P23610 371 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 HNRNPH3P31942 346 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 UGT1A3P35503 534 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 GYS2P54840 703 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 KRTAP10-9P60411 292 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 HNRNPKP61978 463 aaKnown RBP eCLIP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 YWHAGP61981 247 aaKnown RBP eCLIP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ECT2LQ008S8 904 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 POU5F1Q01860 360 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ZFP36L1Q07352 338 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 OVGP1Q12889 678 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TRPC3Q13507 836 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PDE1CQ14123 709 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 INPP5JQ15735 1006 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ARHGAP44Q17R89 818 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 AMZ1Q400G9 498 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ACCSLQ4AC99 568 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 SETMARQ53H47 684 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM133BQ5BKY9 247 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PITRM1Q5JRX3 1037 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 L1TD1Q5T7N2 865 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 PIP5KL1Q5T9C9 394 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 NKAIN2Q5VXU1 208 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ASB18Q6ZVZ8 466 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 BHLHA9Q7RTU4 235 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TIPARPQ7Z3E1 657 aaKnown RBP3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 RD3Q7Z3Z2 195 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 ABI3BPQ7Z7G0 1075 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 TRIM69Q86WT6 500 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 HORMAD1Q86X24 394 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 MFN1Q8IWA4 741 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 MCEMP1Q8IX19 187 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CACNA2D3Q8IZS8 1091 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CRYBG2Q8N1P7 616 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 GPD1LQ8N335 351 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CPXM2Q8N436 756 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CHST14Q8NCH0 376 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FBXO18Q8NFZ0 1043 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FIBINQ8TAL6 211 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 WFIKKN2Q8TEU8 576 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 FAM131CQ96AQ9 280 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 GRAMD1AQ96CP6 724 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 DNAJC19Q96DA6 116 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CYFIP2Q96F07 1278 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 EPSTI1Q96J88 318 aa3.02□□□□□ -1.93
CHMP4A-208ENST00000534106 CDK5RAP3Q96JB5 506 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms