RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CD247P20963 164 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 HRH2P25021 359 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 TMBIM6P55061 237 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.23
CTSB-228ENST00000533455 EMX2Q04743 252 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 SPIDRQ14159 915 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 CBX2Q14781 532 aaPredicted RBP16.52■□□□□ 0.23
CTSB-228ENST00000533455 CRY1Q16526 586 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 ANKRD26P1Q6NSI1 321 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 CD300LGQ6UXG3 332 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 IFNEQ86WN2 208 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 RIMKLAQ8IXN7 391 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 PGBD5Q8N414 524 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 STAG3L4Q8TBR4 150 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 TANKQ92844 425 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 VPS33AQ96AX1 596 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 BIRC7Q96CA5 298 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 TEX37Q96LM6 180 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 NAA50Q9GZZ1 169 aaKnown RBP16.52■□□□□ 0.23
CTSB-228ENST00000533455 SYTL2Q9HCH5 934 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.231e-10■■■■□ 19.6
CTSB-228ENST00000533455 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 TLR6Q9Y2C9 796 aa16.52■□□□□ 0.23
CTSB-228ENST00000533455 TDRKHQ9Y2W6 561 aaKnown RBP16.52■□□□□ 0.23
CTSB-228ENST00000533455 TRPM7Q96QT4 1865 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 CCDC154A6NI56 674 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 SUPT3HB4E1H0 165 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 H0Y858 1186 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 STX16O14662 325 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 SUPT3HO75486 399 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 CRCPO75575 148 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 C1RP00736 705 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 FGF1P05230 155 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 ENO2P09104 434 aaPredicted RBP16.51■□□□□ 0.23
CTSB-228ENST00000533455 HLA-DPA1P20036 260 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 BRCC3P46736 316 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 STC1P52823 247 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 ISG20Q96AZ6 181 aaKnown RBP16.51■□□□□ 0.23
CTSB-228ENST00000533455 PLEKHA8Q96JA3 519 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 BDH2Q9BUT1 245 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 KATNAL1Q9BW62 490 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 CATSPERZQ9NTU4 200 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 ZIM2Q9NZV7 527 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 NUDT5Q9UKK9 219 aa16.51■□□□□ 0.23
CTSB-228ENST00000533455 A0A1W2PQH9 124 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 FOXD2O60548 495 aaPredicted RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 SLC22A3O75751 556 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SEC14L2O76054 403 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 BAIAP3O94812 1187 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 PRSS23O95084 383 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ALBP02768 609 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 CDH1P12830 882 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 CPT1AP50416 773 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 POLR2JP52435 117 aaKnown RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 C21orf59P57076 290 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 NEDD8Q15843 81 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 NANOGP8Q6NSW7 305 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 PRR23BQ6ZRT6 265 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 MRPL10Q7Z7H8 261 aaKnown RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 PSMG2Q969U7 264 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ACDQ96AP0 544 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SOX17Q9H6I2 414 aaPredicted RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 NANOGQ9H9S0 305 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SEMA4BQ9NPR2 832 aaPredicted RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 RNF112Q9ULX5 631 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TRPV2Q9Y5S1 764 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 IGLV3-10A0A075B6K4 115 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 FAM234BA2RU67 622 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 KLK8O60259 260 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ECI2O75521 394 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 UROSP10746 265 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 MBL2P11226 248 aaPredicted RBP16.5■□□□□ 0.23
CTSB-228ENST00000533455 MAGEA8P43361 318 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 UFM1P61960 85 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ERVK-8P63133 956 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TSPY1Q01534 308 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 IL10RBQ08334 325 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TUBA3CQ13748 450 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 IL31Q6EBC2 164 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 OVOS1Q6IE37 1185 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TBPL2Q6SJ96 375 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ANKRD23Q86SG2 305 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SYVN1Q86TM6 617 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 OR4L1Q8NH43 312 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 TMEM74Q96NL1 305 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 CHID1Q9BWS9 393 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 MAGEL2Q9UJ55 1249 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 PCDHB3Q9Y5E6 796 aa16.5■□□□□ 0.23
CTSB-228ENST00000533455 ARL5AQ9Y689 179 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms