RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PKD2L2Q9NZM6 624 aa11.22□□□□□ -0.61
CLCF1-202ENST00000533438 HEY1Q9Y5J3 304 aa11.22□□□□□ -0.61
CLCF1-202ENST00000533438 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 IGHV1OR21-1A0A087WYE8 117 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 PRAMEF33A0A0G2JMD5 474 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 IGHV5-10-1A0A0J9YXX1 117 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 RGSL1A5PLK6 1076 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 C9orf172C9J069 976 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
CLCF1-202ENST00000533438 ZW10O43264 779 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 ATP1A1P05023 1023 aaKnown RBP11.21□□□□□ -0.61
CLCF1-202ENST00000533438 LIPCP11150 499 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
CLCF1-202ENST00000533438 SLC1A1P43005 524 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 FASLGP48023 281 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 LIMK2P53671 638 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 AP1B1Q10567 949 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 GALNT3Q14435 633 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 C16orf72Q14CZ0 275 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 PDK1Q15118 436 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 SLC14A2Q15849 920 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 AMZ1Q400G9 498 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 PHF19Q5T6S3 580 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 CCDC81Q6ZN84 652 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 LYSMD3Q7Z3D4 306 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 JAMLQ86YT9 394 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 GALNT13Q8IUC8 556 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 SFRP1Q8N474 314 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.21□□□□□ -0.61
CLCF1-202ENST00000533438 ADGRE3Q9BY15 652 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 CEP41Q9BYV8 373 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 B3GNT4Q9C0J1 378 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 FAM83DQ9H4H8 585 aa11.21□□□□□ -0.61
CLCF1-202ENST00000533438 CYSRT1A8MQ03 144 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 AGRPO00253 132 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 ASMTLO95671 621 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 EML2O95834 649 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 KRT1P04264 644 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 CSF2RBP32927 897 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 MAPK10P53779 464 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 GNG11P61952 73 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 ETF1P62495 437 aaKnown RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 GPLD1P80108 840 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 TRA2AQ13595 282 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 TGIF1Q15583 401 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 TAZQ16635 292 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 TAF1BQ53T94 588 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 ZNF569Q5MCW4 686 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 MFSD7Q6UXD7 560 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 USP53Q70EK8 1073 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 CHST15Q7LFX5 561 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 TMC3Q7Z5M5 1100 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 DAAM2Q86T65 1068 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 RCBTB1Q8NDN9 531 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 USP7Q93009 1102 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 CCDC74BQ96LY2 380 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 AGAP3Q96P47 875 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 MAK16Q9BXY0 300 aaKnown RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 RMI1Q9H9A7 625 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 ZFYVE1Q9HBF4 777 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 MAGEE1Q9HCI5 957 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 DDX56Q9NY93 547 aaKnown RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 FOXJ2Q9P0K8 574 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 NFKBIL1Q9UBC1 381 aaPredicted RBP11.2□□□□□ -0.62
CLCF1-202ENST00000533438 PRKAB1Q9Y478 270 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 ALG6Q9Y672 507 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 AHCTF1Q8WYP5 2266 aa11.2□□□□□ -0.62
CLCF1-202ENST00000533438 BOD1L1Q8NFC6 3051 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 A6NCN8 305 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.19□□□□□ -0.62
CLCF1-202ENST00000533438 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
CLCF1-202ENST00000533438 THRAP10827 490 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 CCL4P13236 92 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 COMTP21964 271 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 PTPN3P26045 913 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 CD82P27701 267 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 CDKN2BP42772 138 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 ARSDP51689 593 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 DCDC1P59894 354 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 DYNLT1P63172 113 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 CDK18Q07002 472 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
CLCF1-202ENST00000533438 BIRC2Q13490 618 aa11.19□□□□□ -0.62
CLCF1-202ENST00000533438 PRKD1Q15139 912 aaPredicted RBP11.19□□□□□ -0.62
CLCF1-202ENST00000533438 TEX44Q53QW1 395 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms