RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 SNX5Q9Y5X3 404 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 KIAA0355O15063 1070 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ALOX15BO15296 676 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ADAM12O43184 909 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 HGFP14210 728 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ITGAXP20702 1163 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 HCAR3P49019 387 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 CLCNKAP51800 687 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 SIRPB2Q5JXA9 342 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ERN2Q76MJ5 926 aaKnown RBP7.91□□□□□ -1.14
CTNND1-230ENST00000532245 APTXQ7Z2E3 356 aaKnown RBP7.91□□□□□ -1.14
CTNND1-230ENST00000532245 MTDHQ86UE4 582 aaKnown RBP7.91□□□□□ -1.14
CTNND1-230ENST00000532245 GKN2Q86XP6 184 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 DENND6AQ8IWF6 608 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 RPLP0P6Q8NHW5 317 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 FIG4Q92562 907 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 FCRL5Q96RD9 977 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 SH3GL1Q99961 368 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 GSDMCQ9BYG8 508 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 RC3H2Q9HBD1 1191 aaKnown RBP7.91□□□□□ -1.14
CTNND1-230ENST00000532245 KRCC1Q9NPI7 259 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ACSS2Q9NR19 701 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 DNAJC11Q9NVH1 559 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 SLCO3A1Q9UIG8 710 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 TMCC3Q9ULS5 477 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 NDUFAF1Q9Y375 327 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 HEBP2Q9Y5Z4 205 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF780BQ9Y6R6 833 aa7.91□□□□□ -1.14
CTNND1-230ENST00000532245 XIRP1Q702N8 1843 aaKnown RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 TULP3O75386 442 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CDH2P19022 906 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 PBX2P40425 430 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CRATP43155 626 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 DRG2P55039 364 aaKnown RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 KDM7AQ6ZMT4 941 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 DPY19L3Q6ZPD9 716 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CHMP1BQ7LBR1 199 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CYP4Z1Q86W10 505 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CPNE9Q8IYJ1 553 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 TMEM132CQ8N3T6 1108 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF555Q8NEP9 628 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ZSCAN5AQ9BUG6 496 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 HSD3B7Q9H2F3 369 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ADNPQ9H2P0 1102 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ACSS3Q9H6R3 686 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 GDE1Q9NZC3 331 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 PIPSLA2A3N6 862 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 VPS4BO75351 444 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 METTL18O95568 372 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 LINC00032P0C843 101 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 C9orf50Q5SZB4 431 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 LHX8Q68G74 356 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 LRRTM4Q86VH4 590 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 DCBLD1Q8N8Z6 715 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 TPD52L3Q96J77 140 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 HHIPQ96QV1 700 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 NUSAP1Q9BXS6 441 aaKnown RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ATAD3AQ9NVI7 634 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 KLF15Q9UIH9 416 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 MARF1Q9Y4F3 1742 aaKnown RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 CCDC162PA2VCL2 907 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 FAM72CH0Y354 149 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 PRAMEF11O60813 436 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 POU1F1P28069 291 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 SOX9P48436 509 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 RPS7P62081 194 aaKnown RBP7.9□□□□□ -1.14
CTNND1-230ENST00000532245 SERINC3Q13530 473 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 GNA13Q14344 377 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 RASA2Q15283 850 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 FAM72AQ5TYM5 149 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 FAM72DQ6L9T8 149 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 TRIM74Q86UV6 250 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 FAM72BQ86X60 149 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 RASGEF1CQ8N431 466 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ZFP28Q8NHY6 868 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 SPPL2AQ8TCT8 520 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 EME1Q96AY2 570 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 C1orf50Q9BV19 199 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 FUT8Q9BYC5 575 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 HEBP1Q9NRV9 189 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 B4GALT6Q9UBX8 382 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 PCDHB11Q9Y5F2 797 aa7.9□□□□□ -1.14
CTNND1-230ENST00000532245 ANKRD66B4E2M5 251 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 RRM2P31350 389 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 PTGER3P43115 390 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 RING1Q06587 406 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 TNK2Q07912 1038 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 CCINQ13939 588 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 ZNF542PQ5EBM4 170 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 FAM26DQ5JW98 314 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 TTC27Q6P3X3 843 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 ITFG1Q8TB96 612 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 STARD8Q92502 1023 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 NCSTNQ92542 709 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 AZIN2Q96A70 460 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 RAD51AP1Q96B01 352 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 NRBF2Q96F24 287 aa7.9□□□□□ -1.15
CTNND1-230ENST00000532245 KCTD14Q9BQ13 255 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-230ENST00000532245 TBCDQ9BTW9 1192 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms