RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RABL3Q5HYI8 236 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LRIF1Q5T3J3 769 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TBC1D9BQ66K14 1250 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM211Q6ICI0 200 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ANKRD16Q6P6B7 361 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ZNF474Q6S9Z5 364 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 DPY19L3Q6ZPD9 716 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LINGO2Q7L985 606 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TRAPPC11Q7Z392 1133 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ZNF761Q86XN6 746 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LNX2Q8N448 690 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 OR4N2Q8NGD1 307 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 NCOA7Q8NI08 942 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ST7LQ8TDW4 575 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RNF31Q96EP0 1072 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 PBKQ96KB5 322 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ADAD1Q96M93 576 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 COQ10AQ96MF6 247 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MXRA8Q9BRK3 442 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 THAP7Q9BT49 309 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ALOXE3Q9BYJ1 711 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TRIM6Q9C030 488 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RWDD1Q9H446 243 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 FZD8Q9H461 694 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RIBC2Q9H4K1 309 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 NCOR1P1Q9H4R4 102 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RNPEPL1Q9HAU8 725 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 FANCFQ9NPI8 374 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 DNAJC11Q9NVH1 559 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ASNSD1Q9NWL6 643 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MTMR10Q9NXD2 777 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TRMT6Q9UJA5 497 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TSPAN16Q9UKR8 245 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 NME7Q9Y5B8 376 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ADGRA2Q96PE1 1338 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 A0A096LPK6 155 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 A0A1B0GWJ7 208 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 WDR27A2RRH5 827 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 TARSL2A2RTX5 802 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SMIM30A4D0T7 59 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PPP6CO00743 305 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 CLDN4O14493 209 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 RHOP08100 348 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 NPSP0C0P6 89 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM86B2P0C5J1 330 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 KELP23276 732 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 CHRNA5P30532 468 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 CRKLP46109 303 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SULT1E1P49888 294 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ASCL1P50553 236 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 RAD23BP54727 409 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 CDH13P55290 713 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PPP2CBP62714 309 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PPP2CAP67775 309 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PSG6Q00889 435 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SCGB2A2Q13296 93 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ANXA2RQ3ZCQ2 193 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ATP13A5Q4VNC0 1218 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 RNASEH2BQ5TBB1 312 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC25A24Q6NUK1 477 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC27A1Q6PCB7 646 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 KIRREL2Q6UWL6 708 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 LCTLQ6UWM7 567 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 RUFY3Q7L099 469 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 TRILQ7L0X0 811 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ZNF410Q86VK4 478 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 CADM3Q8N126 398 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 BATF2Q8N1L9 274 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 OR14L1PQ8NHC6 308 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 B4GALNT2Q8NHY0 566 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 BRSK1Q8TDC3 778 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 RAD54LQ92698 747 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 IGSF8Q969P0 613 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 MRPL38Q96DV4 380 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SEPHS2Q99611 448 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 FSD1LQ9BXM9 530 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 GPR87Q9BY21 358 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM39BQ9GZU3 492 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 WNT5BQ9H1J7 359 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ISCUQ9H1K1 167 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 VPS37BQ9H9H4 285 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PPANQ9NQ55 473 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 EQTNQ9NQ60 294 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ATAD3AQ9NVI7 634 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 PRMT7Q9NVM4 692 aaPredicted RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM118AQ9NWS6 357 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 SLCO1C1Q9NYB5 712 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ANKFY1Q9P2R3 1169 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 ERVK-11Q9UQG0 969 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 STRAPQ9Y3F4 350 aaKnown RBP4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 U3KQV3 271 aa4.31□□□□□ -1.72
AC055878.1-201ENST00000531858 DHX29Q7Z478 1369 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms