RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ACRV1P26436 265 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 MPP1Q00013 466 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 BEND6Q5SZJ8 279 aaPredicted RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 FBXO38Q6PIJ6 1188 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 ADAMTSL4Q6UY14 1074 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 CYS1Q717R9 158 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 CILP2Q8IUL8 1156 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 HNRNPLLQ8WVV9 542 aaKnown RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 FUBP1Q96AE4 644 aaKnown RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 HIC2Q96JB3 615 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 VPS35Q96QK1 796 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 COPS8Q99627 209 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 PHPT1Q9NRX4 125 aaPredicted RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 TXNDC16Q9P2K2 825 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 FBXO5Q9UKT4 447 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 CNOT6Q9ULM6 557 aaKnown RBP17.5■□□□□ 0.39
CTSB-222ENST00000531551 HS3ST3A1Q9Y663 406 aa17.5■□□□□ 0.39
CTSB-222ENST00000531551 UBA6A0AVT1 1052 aaPredicted RBP17.49■□□□□ 0.39
CTSB-222ENST00000531551 FAM159BA6NKW6 160 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 A6NNZ2 444 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 POC1B-GALNT4F8VUJ3 575 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 CACNB4O00305 520 aaPredicted RBP17.49■□□□□ 0.39
CTSB-222ENST00000531551 PFDN6O15212 129 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 ABHD2P08910 425 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 TRIM23P36406 574 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 PPARGP37231 505 aaPredicted RBP17.49■□□□□ 0.39
CTSB-222ENST00000531551 TTPAP49638 278 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 DBN1Q16643 649 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 SPDYCQ5MJ68 293 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 CERS6Q6ZMG9 384 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 Q6ZSR6 202 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 LMNTD2Q8IXW0 634 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 GPR150Q8NGU9 434 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 NAT14Q8WUY8 206 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 DCUN1D1Q96GG9 259 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 BOCQ9BWV1 1114 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 TMEM98Q9Y2Y6 226 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 LRRK1Q38SD2 2015 aa17.49■□□□□ 0.39
CTSB-222ENST00000531551 TRBV5-4A0A0C4DH59 114 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 EXOC1LA0A1B0GW35 172 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 AGAP14A8MT82 685 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 OR1I1O60431 355 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 H2AFXP16104 143 aaPredicted RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 MSH3P20585 1137 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 OGNP20774 298 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 PDE1CQ14123 709 aaPredicted RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 KLHL38Q2WGJ6 581 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 LDLRAP1Q5SW96 308 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 LYPLAL1Q5VWZ2 237 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 LAYNQ6UX15 382 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 DET1Q7L5Y6 550 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 STRA8Q7Z7C7 330 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 MREGQ8N565 214 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 OR13H1Q8NG92 308 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 DNASE2BQ8WZ79 361 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 TEX101Q9BY14 249 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 TM9SF3Q9HD45 589 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 SMOXQ9NWM0 555 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 ZDHHC3Q9NYG2 299 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 MOSPD1Q9UJG1 213 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 CRYL1Q9Y2S2 319 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 OAS3Q9Y6K5 1087 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 EML5Q05BV3 1969 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 DMDP11532 3685 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 LILRB5O75023 590 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 C1QAP02745 245 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 SHBGP04278 402 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 THEGLP0DJG4 465 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 CD38P28907 300 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 ABCG1P45844 678 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 THOP1P52888 689 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 RACK1P63244 317 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 ZNF789Q5FWF6 425 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 ZC3H14Q6PJT7 736 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 KYAT3Q6YP21 454 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 MARK2Q7KZI7 788 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 LRRC6Q86X45 466 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 CNTN4Q8IWV2 1026 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 C2CD4AQ8NCU7 369 aaPredicted RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 DDHD1Q8NEL9 900 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 OR2W6PQ8NHA6 318 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 PIGKQ92643 395 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 ZBTB9Q96C00 473 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 CCDC97Q96F63 343 aaPredicted RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 ATXN7L3BQ96GX2 97 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 ZC3H10Q96K80 434 aaKnown RBP17.48■□□□□ 0.39
CTSB-222ENST00000531551 CCDC77Q9BR77 488 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 PSAT1Q9Y617 370 aa17.48■□□□□ 0.39
CTSB-222ENST00000531551 HAUS5O94927 633 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 MYCLP1P12525 358 aaPredicted RBP17.47■□□□□ 0.39
CTSB-222ENST00000531551 TEAD1P28347 426 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 RABIFP47224 123 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 PFN3P60673 137 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 IFFO1Q0D2I5 559 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 TMEM115Q12893 351 aaPredicted RBP17.47■□□□□ 0.39
CTSB-222ENST00000531551 TYSND1Q2T9J0 566 aa17.47■□□□□ 0.39
CTSB-222ENST00000531551 KHDC1Q4VXA5 237 aaKnown RBP17.47■□□□□ 0.39
CTSB-222ENST00000531551 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms