RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 QPCTQ16769 361 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 HADHQ16836 314 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 FIGNQ5HY92 759 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 ATP1A1-AS1Q5TC04 95 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 LYSMD3Q7Z3D4 306 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 SLC9B2Q86UD5 537 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 KIAA1143Q96AT1 154 aaPredicted RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 TSGA13Q96PP4 275 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 HERPUD2Q9BSE4 406 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 PRDM8Q9NQV8 689 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 ZNF71Q9NQZ8 489 aaPredicted RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 FBXO8Q9NRD0 319 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 PKD2L2Q9NZM6 624 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 ATXN10Q9UBB4 475 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 GRID2O43424 1007 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 ANP32AP39687 249 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 CD86P42081 329 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 EPHA4P54764 986 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 TAS2R40P59535 323 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 GALNT3Q14435 633 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 KDELC2Q7Z4H8 507 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 PQLC3Q8N755 202 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 KCTD6Q8NC69 237 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 CPLX3Q8WVH0 158 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 FATE1Q969F0 183 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 CATSPER2Q96P56 530 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 CPNE7Q9UBL6 633 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 AMACRQ9UHK6 382 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 TUBD1Q9UJT1 453 aa18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 RPL26L1Q9UNX3 145 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 TMEM184BQ9Y519 407 aaPredicted RBP18.21■□□□□ 0.51
SSSCA1-206ENST00000531405 TNRC6AQ8NDV7 1962 aaKnown RBP18.21■□□□□ 0.5
SSSCA1-206ENST00000531405 ANKRD66B4E2M5 251 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 KCNK1O00180 336 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 CAPN5O15484 640 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 NUAK1O60285 661 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 SERPING1P05155 500 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF8P17098 575 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 GFERP55789 205 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 IQCB1Q15051 598 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 IGFBP7Q16270 282 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 DEFB109BQ30KR1 87 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 PLA2G4EQ3MJ16 856 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 ALS2CLQ60I27 953 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 RAVER1Q8IY67 606 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 CCNYQ8ND76 341 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 C9orf43Q8TAL5 461 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 CCHCR1Q8TD31 782 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 STARD8Q92502 1023 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 EID2BQ96D98 161 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF670Q9BS34 389 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 ZPBPQ9BS86 351 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 MLPHQ9BV36 600 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 BRD8Q9H0E9 1235 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 OR2AG1Q9H205 316 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 CARD9Q9H257 536 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 RMI1Q9H9A7 625 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 HAUS2Q9NVX0 235 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 DTLQ9NZJ0 730 aa18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 SCHIP1Q9P0W5 487 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 MRPS18BQ9Y676 258 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 PRRC2CQ9Y520 2896 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-206ENST00000531405 KIR2DS5A0A0G2JLQ3 304 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 A0A0G2JNG1 304 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 A0A1W2PQJ5 194 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 KIR2DS3K7RE56 304 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 DLGAP3O95886 979 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 JCHAINP01591 159 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC4A1P02730 911 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 PIRTP0C851 137 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC2A4P14672 509 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 TYRP1P17643 537 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 MAN1A1P33908 653 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 UBE2IP63279 158 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SRSF1Q07955 248 aaKnown RBP eCLIP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 ABHD18Q0P651 414 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 ZBTB17Q13105 803 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 KIR2DS5Q14953 304 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 C16orf46Q6P387 395 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 ALKBH5Q6P6C2 394 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 CRTC3Q6UUV7 619 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 PHYKPLQ8IUZ5 450 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 CCDC13Q8IYE1 715 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SYN2Q92777 582 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 FAF2Q96CS3 445 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 HDAC11Q96DB2 347 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 PLEKHG4BQ96PX9 1271 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SPATA16Q9BXB7 569 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 CEP41Q9BYV8 373 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 KLC4Q9NSK0 619 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 SIDT1Q9NXL6 827 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 OGFRQ9NZT2 677 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 ADGRG1Q9Y653 693 aa18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 MN1Q10571 1320 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms