RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 UGT1A3P35503 534 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 UGT1A5P35504 534 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 RASSF2P50749 326 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 ATP6V0D1P61421 351 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 GAB4Q2WGN9 574 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 SEL1L3Q68CR1 1132 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 FRMD7Q6ZUT3 714 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 GPR149Q86SP6 731 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 KDM1BQ8NB78 822 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 EXT2Q93063 718 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 L3HYPDHQ96EM0 354 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 BOCQ9BWV1 1114 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 MTG2Q9H4K7 406 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 SLC28A3Q9HAS3 691 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 B4GALT6Q9UBX8 382 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 SORCS3Q9UPU3 1222 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 PCDHB1Q9Y5F3 818 aa15.33■□□□□ 0.04
CCDC90B-213ENST00000529611 AGAP14A8MT82 685 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 E5RI56 91 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 UBXN8O00124 270 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 KERAO60938 352 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 SMIM24O75264 130 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 LEFTY1O75610 366 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 NFATC1O95644 943 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 ASLP04424 464 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 CTSLP07711 333 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 TPBGLP0DKB5 382 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 ZNF7P17097 686 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 CHRM3P20309 590 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 CALB2P22676 271 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 RPS3P23396 243 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 FCARP24071 287 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 ACRV1P26436 265 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 PTPN4P29074 926 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 CLCN7P51798 805 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 PTPN5P54829 565 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 ELF3P78545 371 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 UBAP2LQ14157 1087 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 TSNQ15631 228 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 RAB30Q15771 203 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 GPR33Q49SQ1 333 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 ZNF678Q5SXM1 525 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 BRAT1Q6PJG6 821 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 RBFAQ8N0V3 343 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 GSTO2Q9H4Y5 243 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 GDE1Q9NZC3 331 aa15.32■□□□□ 0.04
CCDC90B-213ENST00000529611 PRR5-ARHGAP8B1AHC4 643 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SLCO1B7G3V0H7 640 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 C1SP09871 688 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 POLR2LP62875 67 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 HERVK_113P63132 956 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ARHGAP8P85298 464 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ARSIQ5FYB1 569 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 CYB5D1Q6P9G0 228 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 RFLNAQ6ZTI6 216 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 PTGR2Q8N8N7 351 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 STAG3L4Q8TBR4 150 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 NAT14Q8WUY8 206 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 EEF1AKMT1Q8WVE0 214 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 UTP4Q969X6 686 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 PBXIP1Q96AQ6 731 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 MRPL38Q96DV4 380 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 OR52B2Q96RD2 323 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TTC1Q99614 292 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ERVK-6Q9BXR3 956 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 CLPBQ9H078 707 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 VTI1BQ9UEU0 232 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 CRLS1Q9UJA2 301 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SLC8A2Q9UPR5 921 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SZT2Q5T011 3432 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TSPAN11A1L157 253 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TMEM233B4DJY2 109 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 CDC7O00311 574 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 LINC01565O15544 149 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 JUNP05412 331 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ESRRAP11474 423 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SLC6A11P48066 632 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 IL2P60568 153 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 GALNT1Q10472 559 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TBCCQ15814 346 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 UNC50Q53HI1 259 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SH2D4BQ5SQS7 431 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 LYPLAL1Q5VWZ2 237 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 CPNE9Q8IYJ1 553 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 NXPE1Q8N323 547 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ZNF366Q8N895 744 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 NXPE3Q969Y0 559 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 FUBP1Q96AE4 644 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 LINGO1Q96FE5 620 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 NUF2Q9BZD4 464 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 SARS2Q9NP81 518 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TNFRSF12AQ9NP84 129 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 TCF7L2Q9NQB0 619 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 ELOVL2Q9NXB9 296 aa15.31■□□□□ 0.04
CCDC90B-213ENST00000529611 OBP2AQ9NY56 170 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms