RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 LRIG3Q6UXM1 1119 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 NHLRC1Q6VVB1 395 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 RHOUQ7L0Q8 258 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 KCTD9Q7L273 389 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 MCM10Q7L590 875 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 DENND6AQ8IWF6 608 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 HDDC3Q8N4P3 179 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ANKRD20A12PQ8NF67 263 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 DBF4BQ8NFT6 615 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 CMASQ8NFW8 434 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 BCAS4Q8TDM0 211 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 HASPINQ8TF76 798 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 MIB2Q96AX9 1013 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SPSB1Q96BD6 273 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 MSI2Q96DH6 328 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 HES6Q96HZ4 224 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 VCPIP1Q96JH7 1222 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ZNF570Q96NI8 536 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 BBC3Q96PG8 261 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 PRAM1Q96QH2 718 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 CRAMP1Q96RY5 1269 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TMEM79Q9BSE2 394 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 PIMREGQ9BSJ6 248 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 INPP5KQ9BT40 448 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 KATNB1Q9BVA0 655 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 CACNG6Q9BXT2 260 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TSPY26PQ9H489 355 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 LIN28AQ9H9Z2 209 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 CHMP1AQ9HD42 196 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TUFT1Q9NNX1 390 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 GPR108Q9NPR9 543 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 EQTNQ9NQ60 294 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 IARS2Q9NSE4 1012 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 TAS2R14Q9NYV8 317 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 NINJ2Q9NZG7 142 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC24A2Q9UI40 661 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 XPO7Q9UIA9 1087 aaKnown RBP3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 ITGA11Q9UKX5 1188 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 NACADO15069 1562 aa3.54□□□□□ -1.84
AMBRA1-208ENST00000529558 RNF103-CHMP3A0A140T963 221 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 KANSL1LA0AUZ9 987 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC22A23A1A5C7 686 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 SMIM30A4D0T7 59 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TMEM8BA6NDV4 472 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 FOXO6A8MYZ6 492 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TRIM77I1YAP6 450 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 RNF103O00237 685 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HSPB6O14558 160 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 MAP2K7O14733 419 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 EIF3DO15371 548 aaKnown RBP eCLIP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PRAMEF11O60813 436 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 SOCS5O75159 536 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PLAUP00749 431 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TFPIP10646 304 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TFEBP19484 476 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 UBA1P22314 1058 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HOXA11P31270 313 aaPredicted RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ZNF81P51508 661 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 LUMP51884 338 aaPredicted RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 UBASH3AP57075 661 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HTD2P86397 168 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PPP2R2BQ00005 443 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PMPCAQ10713 525 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HSPB3Q12988 150 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 GRIK2Q13002 908 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PRKD1Q15139 912 aaPredicted RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 FUT11Q495W5 492 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 SIGIRRQ6IA17 410 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 CEP85Q6P2H3 762 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 SLC27A1Q6PCB7 646 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PAPD4Q6PIY7 484 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ZBTB49Q6ZSB9 765 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 DET1Q7L5Y6 550 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 CLYBLQ8N0X4 340 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 MRPL43Q8N983 215 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ZBTB44Q8NCP5 570 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PSMA8Q8TAA3 256 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 IL17DQ8TAD2 202 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 GAL3ST4Q96RP7 486 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PKP4Q99569 1192 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HNRNPABQ99729 332 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TRIM7Q9C029 511 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 KRT23Q9C075 422 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 HSD3B7Q9H2F3 369 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 MKKSQ9NPJ1 570 aaPredicted RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 DNAJC17Q9NVM6 304 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 COMMD8Q9NX08 183 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 MCM9Q9NXL9 1143 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 TAS2R3Q9NYW6 316 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ACTR3BQ9P1U1 418 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 OR14J1Q9UGF5 321 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 DBNLQ9UJU6 430 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 PIN4Q9Y237 131 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 CHKBQ9Y259 395 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 RPH3AQ9Y2J0 694 aaPredicted RBP3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ATAD2BQ9ULI0 1458 aa3.53□□□□□ -1.84
AMBRA1-208ENST00000529558 ASTN2O75129 1339 aaPredicted RBP3.52□□□□□ -1.85
AMBRA1-208ENST00000529558 RGSL1A5PLK6 1076 aa3.52□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC9B1P1A6NJY1 282 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms