RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FAM157AC9JC47 383 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 BAIAP3O94812 1187 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TOMM40O96008 361 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 IQCF3P0C7M6 154 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TGFB3P10600 412 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 CHRNB1P11230 501 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 XBP1P17861 261 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 CASTP20810 708 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 ALDH7A1P49419 539 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 MRPS5P82675 430 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 NUCB1Q02818 461 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 SLC18A2Q05940 514 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 PTP4A2Q12974 167 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 PPP2R5BQ15173 497 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 CCDC96Q2M329 555 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 ASPRV1Q53RT3 343 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 Q5PR19 223 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 COLCA1Q6ZS62 124 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF589Q86UQ0 364 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 MON1AQ86VX9 555 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 HEATR4Q86WZ0 1026 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TMC8Q8IU68 726 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 FBXO16Q8IX29 292 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 SAMD14Q8IZD0 417 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TNIP2Q8NFZ5 429 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM163Q8TC26 289 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 HSPH1Q92598 858 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 TRPV6Q9H1D0 765 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 AAMDCQ9H7C9 122 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 JMJD4Q9H9V9 463 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 FZD3Q9NPG1 666 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 DHDHQ9UQ10 334 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 MRPL11Q9Y3B7 192 aaKnown RBP4.94□□□□□ -1.62
CSDE1-212ENST00000529046 LRRC37A2A6NM11 1700 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CUL9Q8IWT3 2517 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CHD7Q9P2D1 2997 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 J3KRW8 73 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 HAS3O00219 553 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 EBAG9O00559 213 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 KIF1CO43896 1103 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 STAM2O75886 525 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 F9P00740 461 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 GH1P01241 217 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CXCL10P02778 98 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 URODP06132 367 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ACTN1P12814 892 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 HOXB6P17509 224 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 TBXAS1P24557 533 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 HSD17B4P51659 736 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CCL23P55773 120 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 GALNT2Q10471 571 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 STXBP2Q15833 593 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ME3Q16798 604 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 DUSP6Q16828 381 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 IMMTQ16891 758 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 FAM43BQ6ZT52 329 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 STOX1Q6ZVD7 989 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 PRSS45Q7RTY3 260 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ADGRG6Q86SQ4 1221 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 SERPINA11Q86U17 422 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CHD1LQ86WJ1 897 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ZDHHC17Q8IUH5 632 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 TBC1D10CQ8IV04 446 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CPXM2Q8N436 756 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 PCYOX1LQ8NBM8 494 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 MCPH1Q8NEM0 835 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 CMASQ8NFW8 434 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 OR6J1Q8NGC5 347 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 PPTC7Q8NI37 304 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 AFAP1L1Q8TED9 768 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 RUFY2Q8WXA3 655 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 RNF125Q96EQ8 232 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 WDR77Q9BQA1 342 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 KRT23Q9C075 422 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 B3GNT4Q9C0J1 378 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 PAIP1Q9H074 479 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 UNC45AQ9H3U1 944 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 DECR2Q9NUI1 292 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ALKBH4Q9NXW9 302 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 THEGQ9P2T0 379 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 ISY1Q9ULR0 285 aaKnown RBP4.93□□□□□ -1.62
CSDE1-212ENST00000529046 COG5Q9UP83 839 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 UMODL1Q5DID0 1318 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 KDM3AQ9Y4C1 1321 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 TRANK1O15050 2925 aa4.93□□□□□ -1.62
CSDE1-212ENST00000529046 VCANP13611 3396 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 CDH23Q9H251 3354 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 B4DGG1 531 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 ZBTB5O15062 677 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 SPTLC2O15270 562 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 NDUFB8O95169 186 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
CSDE1-212ENST00000529046 YWHAQP27348 245 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TKTP29401 623 aaKnown RBP4.92□□□□□ -1.62
CSDE1-212ENST00000529046 HOXC8P31273 242 aa4.92□□□□□ -1.62
CSDE1-212ENST00000529046 TTKP33981 857 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms