RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IFI16Q16666 785 aaKnown RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 SLC9A4Q6AI14 798 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 RAD9BQ6WBX8 426 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 RBM44Q6ZP01 1051 aaKnown RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 PTAR1Q7Z6K3 402 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 VSIG1Q86XK7 387 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 DCP2Q8IU60 420 aaKnown RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 TMEM139Q8IV31 216 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 RHOT1Q8IXI2 618 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 CBARPQ8N350 705 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 CXorf40AQ8TE69 158 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 FATE1Q969F0 183 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 IFT43Q96FT9 208 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 MDFIQ99750 246 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ABCG4Q9H172 646 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 USP29Q9HBJ7 922 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 NOD2Q9HC29 1040 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 DTLQ9NZJ0 730 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 SALL4Q9UJQ4 1053 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ATP8A1Q9Y2Q0 1164 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 COQ6Q9Y2Z9 468 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 REXO2Q9Y3B8 237 aaKnown RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ALG6Q9Y672 507 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 PKDREJQ9NTG1 2253 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 TNRC6AQ8NDV7 1962 aaKnown RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 GNB5O14775 395 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 FZD6O60353 706 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 SDC3O75056 442 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 SOCS5O75159 536 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 DGKAP23743 735 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 LIG3P49916 1009 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 YPEL5P62699 121 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 POLR2LP62875 67 aaKnown RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 EIF2B5Q13144 721 aaKnown RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 PDE1CQ14123 709 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 IRF4Q15306 451 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 TAZQ16635 292 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 WSCD2Q2TBF2 565 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 ZNF542PQ5EBM4 170 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 CFAP58Q5T655 872 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 ALG1LQ6GMV1 187 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 ERAP2Q6P179 960 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 MFSD7Q6UXD7 560 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 LIPIQ6XZB0 460 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 DPPA4Q7L190 304 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 BBS5Q8N3I7 341 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 ARRDC2Q8TBH0 407 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 NSMCE1Q8WV22 266 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 HDAC11Q96DB2 347 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 APOLD1Q96LR9 279 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 NT5MQ9NPB1 228 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 UCKL1Q9NWZ5 548 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 DDX56Q9NY93 547 aaKnown RBP8.45□□□□□ -1.06
SSBP3-212ENST00000528930 PPIL1Q9Y3C6 166 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 HRH3Q9Y5N1 445 aa8.45□□□□□ -1.06
SSBP3-212ENST00000528930 A0A1W2PQ67 120 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 A8MX80 341 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 APOL1O14791 398 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PLD2O14939 933 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PJA2O43164 708 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 SPOPO43791 374 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PIAS2O75928 621 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PGLSO95336 258 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CSF2P04141 144 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 KRT1P04264 644 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 HLA-DQB2P05538 268 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PDHA1P08559 390 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 EPXP11678 715 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 TNNT1P13805 278 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CCNB1P14635 433 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 NME1P15531 152 aaKnown RBP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CDC25BP30305 580 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CDKN2BP42772 138 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 ADCY2Q08462 1091 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PPIDQ08752 370 aaKnown RBP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 NIPAL4Q0D2K0 466 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 LRRC14Q15048 493 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PTPRRQ15256 657 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 SPA17Q15506 151 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 FAM182AQ5T1J6 154 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 TIGD7Q6NT04 549 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-212ENST00000528930 NPNTQ6UXI9 565 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 PARGQ86W56 976 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CCDC13Q8IYE1 715 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CNTD1Q8N815 330 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 IFI44Q8TCB0 444 aa8.44□□□□□ -1.06
SSBP3-212ENST00000528930 CPT1CQ8TCG5 803 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms