RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 STX2P32856 288 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TRIM23P36406 574 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 NUDT1P36639 197 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SLC1A2P43004 574 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CTBP1Q13363 440 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ITGA9Q13797 1035 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PLK5Q496M5 336 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GPR33Q49SQ1 333 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZNF470Q6ECI4 717 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ADAMTSL4Q6UY14 1074 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GCNT7Q6ZNI0 430 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ARMCX6Q7L4S7 300 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 LPCAT2Q7L5N7 544 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TAS2R42Q7RTR8 314 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SERPINA9Q86WD7 417 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CNTN4Q8IWV2 1026 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SUMF1Q8NBK3 374 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 BTN2A2Q8WVV5 523 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FOXJ1Q92949 421 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GLYATL1Q969I3 302 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FUBP1Q96AE4 644 aaKnown RBP12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SERAC1Q96JX3 654 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PKNOX2Q96KN3 472 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SMOXQ9NWM0 555 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 EIF2B4Q9UI10 523 aaKnown RBP12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FBXO5Q9UKT4 447 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PSAT1Q9Y617 370 aa12.06□□□□□ -0.48
TRAF3IP2-211ENST00000528599 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 MEI4A8MW99 385 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PROB1E7EW31 1015 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FPGTO14772 594 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SHBGP04278 402 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TEAD1P28347 426 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 OAS2P29728 719 aaKnown RBP12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CNR2P34972 360 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 LPAL2Q16609 132 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 DBN1Q16643 649 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 KHDC1Q4VXA5 237 aaKnown RBP12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 HSP90B2PQ58FF3 399 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZNF789Q5FWF6 425 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 MRNIPQ6NTE8 343 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZNF449Q6P9G9 518 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TRIM74Q86UV6 250 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 C11orf74Q86VG3 221 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 HEATR4Q86WZ0 1026 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CILP2Q8IUL8 1156 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 NXPE1Q8N323 547 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 C1orf216Q8TAB5 229 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 DNASE2BQ8WZ79 361 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SLC6A18Q96N87 628 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 VPS35Q96QK1 796 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CYTH2Q99418 400 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 LGR4Q9BXB1 951 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TEX101Q9BY14 249 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZFATQ9P243 1243 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CRLS1Q9UJA2 301 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 OR1A2Q9Y585 309 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 HS3ST3A1Q9Y663 406 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CEP192Q8TEP8 1941 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PLXNB3Q9ULL4 1909 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SPAG17Q6Q759 2223 aa12.05□□□□□ -0.48
TRAF3IP2-211ENST00000528599 SLC25A14O95258 325 aaPredicted RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 S1PR4O95977 384 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PYGLP06737 847 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ACRV1P26436 265 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GABRB3P28472 473 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PFN3P60673 137 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 MPP1Q00013 466 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CDK3Q00526 305 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TERF2Q15554 542 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GLIPR1L2Q4G1C9 344 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZNF648Q5T619 568 aaPredicted RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 GPRC6AQ5T6X5 926 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CEP68Q76N32 757 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ABI3BPQ7Z7G0 1075 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CTAGE3PQ8IX95 158 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 LMNTD2Q8IXW0 634 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 PPM1NQ8N819 430 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 C2CD4AQ8NCU7 369 aaPredicted RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 CALML6Q8TD86 181 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ULK4Q96C45 1275 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 COX14Q96I36 57 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 HIC2Q96JB3 615 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 ZC3H10Q96K80 434 aaKnown RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 APOOQ9BUR5 198 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 IRF2BPLQ9H1B7 796 aa12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 FBXO6Q9NRD1 293 aaPredicted RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 OAS3Q9Y6K5 1087 aaKnown RBP12.04□□□□□ -0.48
TRAF3IP2-211ENST00000528599 THADAQ6YHU6 1953 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms