RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TCEAL4Q96EI5 215 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 LRIG1Q96JA1 1093 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 FAM161BQ96MY7 647 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 LENG8Q96PV6 779 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 MCCC1Q96RQ3 725 aaPredicted RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 HTATIP2Q9BUP3 242 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ASB8Q9H765 288 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 EFCAB1Q9HAE3 211 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 ZBTB26Q9HCK0 441 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 LATS2Q9NRM7 1088 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 RAD18Q9NS91 495 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 STOML1Q9UBI4 398 aa14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 TNPO3Q9Y5L0 923 aaKnown RBP14.66□□□□□ -0.06
ECHDC1-220ENST00000528402 AGAP14A8MT82 685 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 SUPT3HB4E1H0 165 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 NEDD8-MDP1E9PL57 170 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 UBXN8O00124 270 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 NEMP1O14524 444 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CCNT2O60583 730 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 SNX2O60749 519 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 FKBP6O75344 327 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 SUPT3HO75486 399 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CLDN7O95471 211 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PRAMEF1O95521 474 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ASLP04424 464 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ALPIP09923 528 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PRSS56P0CW18 603 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 TYRP14679 529 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 POLR2EP19388 210 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 DGKAP23743 735 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CLCN7P51798 805 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 BTKQ06187 659 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 LCP2Q13094 533 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 STX5Q13190 355 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ICE2Q659A1 982 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 METTL2BQ6P1Q9 378 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PGM2L1Q6PCE3 622 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 AAGABQ6PD74 315 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 BRAT1Q6PJG6 821 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 MACC1Q6ZN28 852 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ADAMTSL2Q86TH1 951 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 GPSM1Q86YR5 675 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ADGRG2Q8IZP9 1017 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PELI3Q8N2H9 469 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CELF5Q8N6W0 485 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 DNAJC5GQ8N7S2 189 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PNPLA1Q8N8W4 532 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 KYQ8NBH2 561 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 WFIKKN2Q8TEU8 576 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 FUBP1Q96AE4 644 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 EID2BQ96D98 161 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 MOCOSQ96EN8 888 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 ASIC4Q96FT7 647 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 PLEKHG4BQ96PX9 1271 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 TACO1Q9BSH4 297 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 NUSAP1Q9BXS6 441 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 SHCBP1LQ9BZQ2 653 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 SMG9Q9H0W8 520 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 IL26Q9NPH9 171 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 MRPL40Q9NQ50 206 aaKnown RBP14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 NUDT4Q9NZJ9 180 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 BCAP29Q9UHQ4 241 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CRLS1Q9UJA2 301 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 CCL26Q9Y258 94 aa14.65□□□□□ -0.06
ECHDC1-220ENST00000528402 A0A088AWK7 358 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 LOC100653049A0A140TA62 436 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 EIF3FO00303 357 aaPredicted RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 BTN3A1O00481 513 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 AZIN1O14977 448 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 UBDO15205 165 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 OR1I1O60431 355 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ECI2O75521 394 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 RFPL2O75678 378 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 KRT34O76011 436 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 PAPLNO95428 1278 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ANP32DO95626 131 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 TSPAN12O95859 305 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 RPS17P08708 135 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 CYP2A6P11509 494 aaPredicted RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ZNF30P17039 623 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 BPIP17213 487 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ACRV1P26436 265 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ACTR3P61158 418 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 CLCQ05315 142 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 CUL3Q13618 768 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 KPNB1Q14974 876 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 ACCSLQ4AC99 568 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 JADE3Q92613 823 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 LINGO1Q96FE5 620 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 SMIM14Q96QK8 99 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 PANX3Q96QZ0 392 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 TNKS2Q9H2K2 1166 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 UTP6Q9NYH9 597 aaKnown RBP14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 FBXO10Q9UK96 956 aa14.64□□□□□ -0.07
ECHDC1-220ENST00000528402 GIPC1O14908 333 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 NIPSNAP2O75323 286 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 ENTPD5O75356 428 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 CDK14O94921 469 aa14.63□□□□□ -0.07
ECHDC1-220ENST00000528402 PSMG1O95456 288 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms