RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FBXO16Q8IX29 292 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-214ENST00000528165 RDH12Q96NR8 316 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 TKTL2Q9H0I9 626 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 SIAEQ9HAT2 523 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 KLHL3Q9UH77 587 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 MAGEL2Q9UJ55 1249 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 HACL1Q9UJ83 578 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 ASPDHA6ND91 283 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 FAM47E-STBD1D6RA91 191 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 G3V2T6 193 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 SLC22A1O15245 554 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 BMP4P12644 408 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 RCVRNP35243 200 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 ADRA1AP35348 466 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 MTHFRP42898 656 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 ZNF135P52742 658 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-214ENST00000528165 GP2P55259 537 aaKnown RBP14.58□□□□□ -0.08
CAPN1-214ENST00000528165 MAP3K7CLP57077 242 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 OR4D2P58180 307 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 EPS8Q12929 822 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 PRAMEF18Q5VWM3 479 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 SLC22A16Q86VW1 577 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 MFSD4AQ8N468 514 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 GLMNQ92990 594 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 PTERQ96BW5 349 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 ZNF560Q96MR9 790 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 LRRC3Q9BY71 257 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 SPC25Q9HBM1 224 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 SLAMF8Q9P0V8 285 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 LOC285556D6RIA3 1793 aa14.58□□□□□ -0.08
CAPN1-214ENST00000528165 LRRC14BA6NHZ5 514 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 ZNF99A8MXY4 864 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 TNPO2O14787 897 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 CYBBP04839 570 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 RAP2AP10114 183 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SLC26A3P40879 764 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 CHRNB3Q05901 458 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SF3B4Q15427 424 aaKnown RBP eCLIP14.57□□□□□ -0.084e-8■■■■■ 27.9
CAPN1-214ENST00000528165 PFKFB4Q16877 469 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 CLEC20AQ6ZU45 233 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PIM3Q86V86 326 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 ITFG1Q8TB96 612 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 TEX37Q96LM6 180 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 NSUN5Q96P11 429 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 VTA1Q9NP79 307 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 LTB4R2Q9NPC1 389 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 POLE4Q9NR33 117 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 INTS7Q9NVH2 962 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SUN2Q9UH99 717 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 UBQLN1Q9UMX0 589 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 CAPN15O75808 1086 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SOAT2O75908 522 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PRSS23O95084 383 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 C1RP00736 705 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PGK2P07205 417 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 AGXTP21549 392 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 ILF2Q12905 390 aaKnown RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PCSK7Q16549 785 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 TIGD2Q4W5G0 525 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SPATA19Q7Z5L4 167 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SULF1Q8IWU6 871 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 TMEM199Q8N511 208 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 LINC01465Q8N7H1 131 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 ZNF419Q96HQ0 510 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PPP1R2P1Q96PQ5 205 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 FBXO8Q9NRD0 319 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 GDAP2Q9NXN4 497 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 PLXNA1Q9UIW2 1896 aa14.57□□□□□ -0.08
CAPN1-214ENST00000528165 SLC22A3O75751 556 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 GABARAPO95166 117 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 F9P00740 461 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 SLC4A1P02730 911 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 ENO2P09104 434 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 CD47Q08722 323 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 CTU2Q2VPK5 515 aaKnown RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 LDB1Q86U70 411 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 NDNFQ8TB73 568 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 RNF34Q969K3 372 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 BCL7BQ9BQE9 202 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 SMURF2Q9HAU4 748 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 SCUBE2Q9NQ36 999 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 KLQ9UEF7 1012 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 GINS2Q9Y248 185 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 FNDC1Q4ZHG4 1894 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 ANKRD12Q6UB98 2062 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 TSC2P49815 1807 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 A8MU76 341 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 PIRO00625 290 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 SOCS7O14512 581 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 CD4P01730 458 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 POLR2JP52435 117 aaKnown RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 RABGGTBP53611 331 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 DAOAP59103 153 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 UFM1P61960 85 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 LSM3P62310 102 aaKnown RBP14.56□□□□□ -0.08
CAPN1-214ENST00000528165 EMX2Q04743 252 aa14.56□□□□□ -0.08
CAPN1-214ENST00000528165 NOMO2Q5JPE7 1267 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms