RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TTC9Q92623 222 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 USP7Q93009 1102 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 RNF25Q96BH1 459 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 AHCYL2Q96HN2 611 aaKnown RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 CALR3Q96L12 384 aaKnown RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TEKT5Q96M29 485 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TAAR9Q96RI9 348 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 SLC38A3Q99624 504 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 BAG1Q99933 345 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 NUDT22Q9BRQ3 303 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 EPB41L1Q9H4G0 881 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 RDH14Q9HBH5 336 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 GLOD4Q9HC38 313 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TRIM39Q9HCM9 518 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 LUC7LQ9NQ29 371 aaKnown RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 PDP2Q9P2J9 529 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 PLEKHM1Q9Y4G2 1056 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 A0A0A6YYK5 440 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 KIR2DS5A0A0G2JLQ3 304 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 A0A0G2JNG1 304 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 FADS2P1A8MWK0 482 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 KIR2DS3K7RE56 304 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 GRID2O43424 1007 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 DUX1O43812 170 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 SLC25A14O95258 325 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 NDST3O95803 873 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 ITIH1P19827 911 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 COMTP21964 271 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 CSTF2P33240 577 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 CDKN2BP42772 138 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 MAGEA1P43355 309 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 TNNT3P45378 269 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 NOP2P46087 812 aaKnown RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 MAPK10P53779 464 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 GALNT3Q14435 633 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 KIR2DS5Q14953 304 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 ZNF569Q5MCW4 686 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 ZDHHC20Q5W0Z9 365 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 WDR74Q6RFH5 385 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 MFSD7Q6UXD7 560 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 DTX1Q86Y01 620 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 TMEM139Q8IV31 216 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 DTX3LQ8TDB6 740 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 SLC37A2Q8TED4 501 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 TFB1MQ8WVM0 346 aaKnown RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 VAT1Q99536 393 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 SPATA16Q9BXB7 569 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 ASPSCR1Q9BZE9 553 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 GPR63Q9BZJ6 419 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 ALG6Q9Y672 507 aa14.05□□□□□ -0.16
CAPN1-212ENST00000527887 OAS3Q9Y6K5 1087 aaKnown RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 HELZ2Q9BYK8 2649 aaKnown RBP14.05□□□□□ -0.16
CAPN1-212ENST00000527887 PRAMEF33A0A0G2JMD5 474 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 B4E171 279 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 C9orf172C9J069 976 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 STMND1H3BQB6 276 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 VEGFDO43915 354 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 PRAMEF10O60809 474 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 C1QL1O75973 258 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 ZRANB2O95218 330 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-212ENST00000527887 LCA5LO95447 670 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 ATP1A1P05023 1023 aaKnown RBP14.04□□□□□ -0.16
CAPN1-212ENST00000527887 THRAP10827 490 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 F3P13726 295 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 PTPN3P26045 913 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 ETV5P41161 510 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 TSPAN7P41732 249 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 EPHA4P54764 986 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 RAB15P59190 212 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 DYNLT1P63172 113 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 HHEXQ03014 270 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 PRKD1Q15139 912 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-212ENST00000527887 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 NPNTQ6UXI9 565 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 PHYKPLQ8IUZ5 450 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 RCOR2Q8IZ40 523 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 ZNF843Q8N446 348 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 ZSCAN1Q8NBB4 408 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 P3H4Q92791 437 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 EID2BQ96D98 161 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 CCDC74BQ96LY2 380 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 PLEKHG4BQ96PX9 1271 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 DDA1Q9BW61 102 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 UCK1Q9HA47 277 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 TBC1D29Q9UFV1 150 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 FAM153AQ9UHL3 310 aa14.04□□□□□ -0.16
CAPN1-212ENST00000527887 UNC13CQ8NB66 2214 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 LOC285095A0A1B0GVY8 99 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 A6NCN8 305 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 HACD1B0YJ81 288 aa14.03□□□□□ -0.16
CAPN1-212ENST00000527887 CHUKO15111 745 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms