RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 EIF3IQ13347 325 aaKnown RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SQSTM1Q13501 440 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 LRP8Q14114 963 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SPA17Q15506 151 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 TGIF1Q15583 401 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 KHDC1Q4VXA5 237 aaKnown RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 ODF2Q5BJF6 829 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 AADACL2Q6P093 401 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 BBS12Q6ZW61 710 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CHST15Q7LFX5 561 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR155Q7Z3F1 870 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SFRP1Q8N474 314 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 TTC30BQ8N4P2 665 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 ACRBPQ8NEB7 543 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC37A2Q8TED4 501 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 P3H4Q92791 437 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 MRGPRX2Q96LB1 330 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 QKIQ96PU8 341 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SPATA16Q9BXB7 569 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 DPH1Q9BZG8 443 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR63Q9BZJ6 419 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 STRADBQ9C0K7 418 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 OR2AG1Q9H205 316 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 BPIFA1Q9NP55 256 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 FOXJ2Q9P0K8 574 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 NFKBIL1Q9UBC1 381 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC23A2Q9UGH3 650 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 FAM153AQ9UHL3 310 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 PCDHGA7Q9Y5G6 932 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 BPTFQ12830 3046 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 PRAMEF33A0A0G2JMD5 474 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 A0A0U1RQJ8 604 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 C9orf172C9J069 976 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 GRID2O43424 1007 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PRAMEF10O60809 474 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 MTX2O75431 263 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PRB1P04280 392 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 MPSTP25325 297 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 RBL1P28749 1068 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR3P46089 330 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 DCDC1P59894 354 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PPP2R5EQ16537 467 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 MAP9Q49MG5 647 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 SIRPB2Q5JXA9 342 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PHF19Q5T6S3 580 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 ARHGAP40Q5TG30 622 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 IYDQ6PHW0 289 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 BZW1Q7L1Q6 419 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PID1Q7Z2X4 250 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 DAAM2Q86T65 1068 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PIM3Q86V86 326 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 ZFAND4Q86XD8 727 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 JAMLQ86YT9 394 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 TMTC1Q8IUR5 882 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 TMEM139Q8IV31 216 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC50Q8IVM0 306 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC25A41Q8N5S1 370 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 TRAM1L1Q8N609 369 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 RCBTB1Q8NDN9 531 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 HTR3CQ8WXA8 447 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 ALG3Q92685 438 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 USP7Q93009 1102 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 GLYATL1Q969I3 302 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PMEPA1Q969W9 287 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC74BQ96LY2 380 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 FCRL5Q96RD9 977 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 UBL7Q96S82 380 aaPredicted RBP10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 FAM118BQ9BPY3 351 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 CARD9Q9H257 536 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 RMI1Q9H9A7 625 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 TRIM39Q9HCM9 518 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PRDM8Q9NQV8 689 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 SCHIP1Q9P0W5 487 aaPredicted RBP10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 ACSL6Q9UKU0 697 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
PRPF40B-204ENST00000527253 SMG1Q96Q15 3661 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 GRID2IPA4D2P6 1211 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 PRR19A6NJB7 356 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 BTNL10A8MVZ5 291 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 HACD1B0YJ81 288 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 APOC4-APOC2K7ER74 178 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 GAPDHSO14556 408 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 CHUKO15111 745 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ATXN7O15265 892 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 NVLO15381 856 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 PJA2O43164 708 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 BUD23O43709 281 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 SNX2O60749 519 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 C1QL1O75973 258 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC25A14O95258 325 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 AGTP01019 485 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 EPOP01588 193 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 APOC2P02655 101 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 FGF3P11487 239 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 CTNNA2P26232 953 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 FASLGP48023 281 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 ARSDP51689 593 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 LIMK2P53671 638 aa10.31□□□□□ -0.76
PRPF40B-204ENST00000527253 MAPK10P53779 464 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms