RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 PLAC1Q9HBJ0 212 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 MRPL40Q9NQ50 206 aaKnown RBP16.5■□□□□ 0.23
SMCO4-204ENST00000527149 KLQ9UEF7 1012 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 DMGDHQ9UI17 866 aaKnown RBP16.5■□□□□ 0.23
SMCO4-204ENST00000527149 PCYT1BQ9Y5K3 369 aaPredicted RBP16.5■□□□□ 0.23
SMCO4-204ENST00000527149 DGKBQ9Y6T7 804 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ARHGEF17Q96PE2 2063 aaPredicted RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PIKFYVEQ9Y2I7 2098 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ESYT3A0FGR9 886 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 CCDC162PA2VCL2 907 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 SDR42E2A6NKP2 422 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 E7ESA3 106 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PRSS56P0CW18 603 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 KELP23276 732 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 HTR1BP28222 390 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 POLD2P49005 469 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 CCT8P50990 548 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 DRG2P55039 364 aaKnown RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 SRP54P61011 504 aaKnown RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ITGA9Q13797 1035 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 GPRC6AQ5T6X5 926 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ENPP7Q6UWV6 458 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ALYREFQ86V81 257 aaKnown RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PIANPQ8IYJ0 282 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 KIAA2013Q8IYS2 634 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 TSACCQ96A04 125 aaPredicted RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 MFSD3Q96ES6 412 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 CCDC97Q96F63 343 aaPredicted RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 LRRC61Q9BV99 259 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ARFGAP3Q9NP61 516 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 DNAJC28Q9NX36 388 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 VPS18Q9P253 973 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 ANAPC5Q9UJX4 755 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 TMEM98Q9Y2Y6 226 aa16.49■□□□□ 0.23
SMCO4-204ENST00000527149 UTP11Q9Y3A2 253 aaKnown RBP16.49■□□□□ 0.23
SMCO4-204ENST00000527149 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 FAM237BA0A1B0GVD1 139 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 PRSS38A1L453 326 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 OR51F1A6NGY5 319 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 PCDHGA12O60330 932 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 DFNA5O60443 496 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 DNAJC6O75061 913 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 PIAS2O75928 621 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 IVLP07476 585 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ARRB1P49407 418 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 CDKN1CP49918 316 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 HK3P52790 923 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ATXN3P54252 364 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 IL9RQ01113 521 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 DHX9Q08211 1270 aaKnown RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 HIF1AQ16665 826 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF648Q5T619 568 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 STPG1Q5TH74 334 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 PSAPL1Q6NUJ1 521 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 DOK6Q6PKX4 331 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 CES3Q6UWW8 571 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 DBX2Q6ZNG2 339 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 SNX20Q7Z614 316 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ADGRG6Q86SQ4 1221 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 IGDCC3Q8IVU1 814 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 BBOF1Q8ND07 529 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 SAP25Q8TEE9 199 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ART4Q93070 314 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 HDAC10Q969S8 669 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 SGSM3Q96HU1 749 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 FCRL3Q96P31 734 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ASB8Q9H765 288 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 TM7SF3Q9NS93 570 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 ATXN10Q9UBB4 475 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
SMCO4-204ENST00000527149 IGLV3-16A0A075B6K0 115 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ZCWPW2A0A1B0GU75 182 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 C4orf47A7E2U8 309 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 NDC80O14777 642 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 YKT6O15498 198 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 SDC3O75056 442 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 MTX2O75431 263 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 SLC25A14O95258 325 aaPredicted RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 RASGRP1O95267 797 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 GOT2P00505 430 aaKnown RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 CELA2BP08218 269 aaPredicted RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 GIMD1P0DJR0 217 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 CD59P13987 128 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 JUNDP17535 347 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ITGALP20701 1170 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 ARCN1P48444 511 aaKnown RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 B4GALNT1Q00973 533 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 PPARDQ03181 441 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 BNIP3Q12983 259 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 GPR33Q49SQ1 333 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 GLE1Q53GS7 698 aaKnown RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 KIAA0930Q6ICG6 404 aaPredicted RBP16.47■□□□□ 0.23
SMCO4-204ENST00000527149 AFTPHQ6ULP2 937 aa16.47■□□□□ 0.23
SMCO4-204ENST00000527149 HID1Q8IV36 788 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms