RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ANKRD45Q5TZF3 282 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 ERC1Q8IUD2 1116 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 C11orf53Q8IXP5 236 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 LSM14AQ8ND56 463 aaKnown RBP2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 TNIP2Q8NFZ5 429 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 THAP6Q8TBB0 222 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 SLC44A1Q8WWI5 657 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 APBB2Q92870 758 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 SLC41A2Q96JW4 573 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 ZSCAN31Q96LW9 406 aaPredicted RBP2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 FAM110AQ9BQ89 295 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 TRPC7Q9HCX4 862 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 PTTG2Q9NZH5 202 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 TMEM181Q9P2C4 612 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 FEM1BQ9UK73 627 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 CEPT1Q9Y6K0 416 aa2.41□□□□□ -2.02
ECHDC1-219ENST00000526299 OR5K3A6NET4 321 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 C5orf60A6NFR6 353 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 TMEM178BH3BS89 294 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 IFNL4K9M1U5 179 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 SYNCRIPO60506 623 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 URODP06132 367 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 CNPP09543 421 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 IGHV4-38-2P0DP08 117 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 IRF1P10914 325 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 FASLGP48023 281 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 CLDN20P56880 219 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PPARDQ03181 441 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 TRIM14Q14142 442 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 DECR1Q16698 335 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 ADCK5Q3MIX3 580 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 FRG2Q64ET8 278 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PWWP2BQ6NUJ5 590 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 CCDC174Q6PII3 467 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PLXDC2Q6UX71 529 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 SUGP1Q8IWZ8 645 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 USP38Q8NB14 1042 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 RDM1Q8NG50 284 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 NOC3LQ8WTT2 800 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 POF1BQ8WVV4 589 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PHF21AQ96BD5 680 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PKP2Q99959 881 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 SIX2Q9NPC8 291 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 ACSS1Q9NUB1 689 aaPredicted RBP2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 PLCXD1Q9NUJ7 323 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 CSAG2Q9Y5P2 127 aa2.4□□□□□ -2.03
ECHDC1-219ENST00000526299 SHROOM4Q9ULL8 1493 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 MAGEB17A8MXT2 336 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 PRR32B1ATL7 298 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 H0YIN7 160 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 HS3ST1O14792 307 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 ZFAND5O76080 213 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 EML2O95834 649 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 EDN1P05305 212 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 TFAP2AP05549 437 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 TPOP07202 933 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 VEGFAP15692 232 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 NR2F2P24468 414 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 CCR10P46092 362 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC6A12P48065 614 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 TDGQ13569 410 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 PRKG1Q13976 671 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 RNPS1Q15287 305 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 ASPRV1Q53RT3 343 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 TXNDC8Q6A555 127 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 TMEM81Q6P7N7 255 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 LONP2Q86WA8 852 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 NRROSQ86YC3 692 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 SCML4Q8N228 414 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 LINC00612Q8N6U2 182 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNRF4Q8WWF5 429 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 PRMT6Q96LA8 375 aaPredicted RBP2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 FOXN4Q96NZ1 517 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 IFIH1Q9BYX4 1025 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 C20orf141Q9NUB4 165 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 PRAG1Q86YV5 1406 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 PCNX3Q9H6A9 2034 aa2.39□□□□□ -2.03
ECHDC1-219ENST00000526299 A0A0G2JNG1 304 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 VCYO14598 125 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC22A2O15244 555 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 PRC1O43663 620 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 PDE9AO76083 593 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 MLYCDO95822 493 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 KRT19P08727 400 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 CDC25CP30307 473 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 CDH15P55291 814 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 SP3Q02447 781 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 KIR2DS5Q14953 304 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 MYLK3Q32MK0 819 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF766Q5HY98 468 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 PQLC2Q6ZP29 291 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 QSOX2Q6ZRP7 698 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF611Q8N823 705 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 TRAPPC12Q8WVT3 735 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 DNAAF4Q8WXU2 420 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 ELP4Q96EB1 424 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 OXNAD1Q96HP4 312 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms