RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SMOXQ9NWM0 555 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SYBUQ9NX95 663 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 VPS18Q9P253 973 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SLC2A6Q9UGQ3 507 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 APOBEC3BQ9UH17 382 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 CDV3Q9UKY7 258 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 OAS3Q9Y6K5 1087 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF106Q9H2Y7 1883 aaKnown RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 LRP4O75096 1905 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 CCDC78A2IDD5 438 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SDR42E2A6NKP2 422 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 AGAP14A8MT82 685 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 EFCAB8A8MWE9 144 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SMAPO00193 183 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 TP73O15350 636 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 GPR39O43194 453 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SEC31AO94979 1220 aaKnown RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ASMTLO95671 621 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 IVLP07476 585 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 CA5AP35218 305 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ARSDP51689 593 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ACVR1Q04771 509 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 NFATC2Q13469 925 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 MORF4L2Q15014 288 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 HIBCHQ6NVY1 386 aaPredicted RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 DOK6Q6PKX4 331 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 PIP4P1Q86T03 277 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 MNS1Q8NEH6 495 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF548Q8NEK5 533 aaPredicted RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SNF8Q96H20 258 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ERP44Q9BS26 406 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 TRIM31Q9BZY9 425 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ASB8Q9H765 288 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SUDS3Q9H7L9 328 aaPredicted RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 UCKL1Q9NWZ5 548 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 ATXN10Q9UBB4 475 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 MOSPD1Q9UJG1 213 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 SOX13Q9UN79 622 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 CSNK1G3Q9Y6M4 447 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 PCNX2A6NKB5 2137 aa12.81□□□□□ -0.36
SMPD1-202ENST00000526280 BPTFQ12830 3046 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 MAGEB16A2A368 324 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SCAMP1O15126 338 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 FLRT2O43155 660 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 AQP9O43315 295 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SH3BP5O60239 455 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 DNAJC6O75061 913 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 GIMD1P0DJR0 217 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ITGALP20701 1170 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 MC4RP32245 332 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 RPL21P46778 160 aaKnown RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ID4P47928 161 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ITGA8P53708 1063 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 GPR33Q49SQ1 333 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 KHDC1Q4VXA5 237 aaKnown RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 LDLRAP1Q5SW96 308 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF648Q5T619 568 aaPredicted RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 DUPD1Q68J44 220 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SNX20Q7Z614 316 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ADGRG6Q86SQ4 1221 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 NAXDQ8IW45 347 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 FSTL5Q8N475 847 aaPredicted RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 MMGT1Q8N4V1 131 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 DDHD1Q8NEL9 900 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 LMX1AQ8TE12 382 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SETD7Q8WTS6 366 aaKnown RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 HDAC10Q969S8 669 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 CARD6Q9BX69 1037 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 CLPBQ9H078 707 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 OR2AG1Q9H205 316 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 RMI1Q9H9A7 625 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 CARS2Q9HA77 564 aaKnown RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 TREX1Q9NSU2 369 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 DLL3Q9NYJ7 618 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 ANAPC5Q9UJX4 755 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 BTBD3Q9Y2F9 522 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SNX24Q9Y343 169 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
SMPD1-202ENST00000526280 V9GYY5 206 aaPredicted RBP12.8□□□□□ -0.36
SMPD1-202ENST00000526280 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 TRBV5-4A0A0C4DH59 114 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CCDC162PA2VCL2 907 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 NEMP2A6NFY4 417 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 GPR89AB7ZAQ6 455 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 LMO7DNF2Z398 122 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 CHUKO15111 745 aa12.79□□□□□ -0.36
SMPD1-202ENST00000526280 VEGFDO43915 354 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms